RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 OLFM1Q99784 485 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 TUBB6Q9BUF5 446 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 TRIM54Q9BYV2 358 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 DPH5Q9H2P9 285 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 PLAC1Q9HBJ0 212 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 HCN3Q9P1Z3 774 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 VWA7Q9Y334 891 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 KLF2Q9Y5W3 355 aaPredicted RBP18.09■□□□□ 0.49
CBWD3-204ENST00000377349 TEX264Q9Y6I9 313 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 MED13LQ71F56 2210 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 IGHV3-20A0A0C4DH32 117 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 SLC16A5O15375 505 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 PRAMEF2O60811 474 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 RASAL1O95294 804 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 C8orf89P0DMQ9 161 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 IL1RNP18510 177 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 POU3F2P20265 443 aaPredicted RBP18.08■□□□□ 0.49
CBWD3-204ENST00000377349 PMP22Q01453 160 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 MINDY4Q4G0A6 757 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 CAPN13Q6MZZ7 669 aaPredicted RBP18.08■□□□□ 0.49
CBWD3-204ENST00000377349 STRA8Q7Z7C7 330 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 ZBED8Q8IZ13 594 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 DNAJB8Q8NHS0 232 aa18.08■□□□□ 0.49
CBWD3-204ENST00000377349 OR2W5A6NFC9 320 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 SEC24DO94855 1032 aaPredicted RBP18.07■□□□□ 0.48
CBWD3-204ENST00000377349 ICAM2P13598 275 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 BCL6P41182 706 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 CA7P43166 264 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 RPL21P46778 160 aaKnown RBP18.07■□□□□ 0.48
CBWD3-204ENST00000377349 CSNK1G2P78368 415 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 MGAT5Q09328 741 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 ZNF460Q14592 562 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 LRRC39Q96DD0 335 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 TSNARE1Q96NA8 513 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 RBCK1Q9BYM8 510 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 PSAT1Q9Y617 370 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 DNAJC13O75165 2243 aa18.07■□□□□ 0.48
CBWD3-204ENST00000377349 TRGV8A0A0C4DH27 118 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 NPEPPSL1A6NEC2 478 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 H0YIG0 161 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 SGK494L7N484 410 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 PIAS1O75925 651 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 NSA2O95478 260 aaKnown RBP18.06■□□□□ 0.48
CBWD3-204ENST00000377349 CRYABP02511 175 aaKnown RBP18.06■□□□□ 0.48
CBWD3-204ENST00000377349 CCND1P24385 295 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 HRH2P25021 359 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 ELAVL4P26378 380 aaKnown RBP18.06■□□□□ 0.48
CBWD3-204ENST00000377349 ZNF33BQ06732 778 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 ABHD17BQ5VST6 288 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 STEAP4Q687X5 459 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 H3F3CQ6NXT2 135 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 TMEM207Q6UWW9 146 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 ASPGQ86U10 573 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 C17orf53Q8N3J3 647 aaPredicted RBP18.06■□□□□ 0.48
CBWD3-204ENST00000377349 CYTH2Q99418 400 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 NPAS2Q99743 824 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 STMN3Q9NZ72 180 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 SEC14L3Q9UDX4 400 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 CORO1CQ9ULV4 474 aaPredicted RBP18.06■□□□□ 0.48
CBWD3-204ENST00000377349 ZNF407Q9C0G0 2248 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 KCNE1BA0A087WTH5 132 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 FAM95CA0A1B0GW59 222 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 ZNF860A6NHJ4 632 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 OR1F1O43749 312 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 TSPAN12O95859 305 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 CYC1P08574 325 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 SLC35G6P0C7Q6 338 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 AP2B1P63010 937 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 C2orf54Q08AI8 447 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 FCRLBQ6BAA4 426 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 PLAG1Q6DJT9 500 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 TMEM214Q6NUQ4 689 aaKnown RBP18.06■□□□□ 0.48
CBWD3-204ENST00000377349 LCTLQ6UWM7 567 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 BNC2Q6ZN30 1099 aaPredicted RBP18.06■□□□□ 0.48
CBWD3-204ENST00000377349 CPEB2Q7Z5Q1 589 aaKnown RBP18.06■□□□□ 0.48
CBWD3-204ENST00000377349 MRGPRGQ86SM5 289 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 SLC26A11Q86WA9 606 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 ZNF808Q8N4W9 903 aaPredicted RBP18.06■□□□□ 0.48
CBWD3-204ENST00000377349 KCT2Q8NC54 265 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 CAMKVQ8NCB2 501 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 SLC13A3Q8WWT9 602 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 METTL21AQ8WXB1 218 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 PDLIM2Q96JY6 352 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 EGFL8Q99944 293 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 HAUS8Q9BT25 410 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 ANKHQ9HCJ1 492 aa18.06■□□□□ 0.48
CBWD3-204ENST00000377349 ZFHX3Q15911 3703 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 CCL21O00585 134 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 NDUFS4O43181 175 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 RDH16O75452 317 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 XCR1P46094 333 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 CCR8P51685 355 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 AP1S2P56377 157 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 CALCOCO2Q13137 446 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 DUPD1Q68J44 220 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 FRA10AC1Q70Z53 315 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 GALNT7Q86SF2 657 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 PDSS2Q86YH6 399 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 BEST3Q8N1M1 668 aa18.05■□□□□ 0.48
CBWD3-204ENST00000377349 MDS2Q8NDY4 140 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms