RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	UMPS	P11172	480 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	BCKDHA	P12694	445 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	HEPACAM	Q14CZ8	416 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	GPR68	Q15743	365 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	LEXM	Q3ZCV2	418 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	PYCR3	Q53H96	274 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	WASHC2D	Q5SRD0	308 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	RNF43	Q68DV7	783 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	REP15	Q6BDI9	236 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	NXPE4	Q6UWF7	544 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	LRRC70	Q7Z2Q7	622 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	KIAA2013	Q8IYS2	634 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	GHDC	Q8N2G8	530 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	EZH1	Q92800	747 aa	Predicted RBP	13	□□□□□ -0.33
DDR1-225	ENST00000376568	ROGDI	Q9GZN7	287 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	CD320	Q9NPF0	282 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13	□□□□□ -0.33
DDR1-225	ENST00000376568		A6NL46	340 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	hCG_2039718	K7EN88	272 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	CLDN4	O14493	209 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	SPINT1	O43278	529 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	EBLN1	P0CF75	366 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	ERVK-8	P63133	956 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	GSTM4	Q03013	218 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	NUDT13	Q86X67	352 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	ULK2	Q8IYT8	1036 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	OR2T12	Q8NG77	320 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	OR9A4	Q8NGU2	314 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	RGMA	Q96B86	450 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	UBXN10	Q96LJ8	280 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	DHRS4	Q9BTZ2	278 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	STOML1	Q9UBI4	398 aa		13	□□□□□ -0.33
DDR1-225	ENST00000376568	RUVBL1	Q9Y265	456 aa	Known RBP	13	□□□□□ -0.33
DDR1-225	ENST00000376568	PIKFYVE	Q9Y2I7	2098 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	CDC14C	A4D256	554 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	TMEM221	A6NGB7	291 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568		M0R296	226 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	DUX1	O43812	170 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	GUCY1B2	O75343	617 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	GTF2A1	P52655	376 aa	Predicted RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	PTPN5	P54829	565 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	FOXL2	P58012	376 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	PUS10	Q3MIT2	529 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	TBC1D21	Q8IYX1	336 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	DTWD1	Q8N5C7	304 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	RHEBL1	Q8TAI7	183 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	NELL1	Q92832	810 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	SORT1	Q99523	831 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	SELENON	Q9NZV5	590 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	CEP295	Q9C0D2	2601 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	IGHV1OR15-9	A0A0B4J2B8	117 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	CFAP73	A6NFT4	308 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	VPS4B	O75351	444 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	UBTFL6	P0CB48	400 aa	Predicted RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	HOXB3	P14651	431 aa	Predicted RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	CLNS1A	P54105	237 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	LIPE	Q05469	1076 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	SRSF11	Q05519	484 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	ZNF750	Q32MQ0	723 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	HSF5	Q4G112	596 aa	Predicted RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	IRAK1BP1	Q5VVH5	260 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	CYS1	Q717R9	158 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	OLIG3	Q7RTU3	272 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	UBALD2	Q8IYN6	164 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	PJA1	Q8NG27	643 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	SSU72	Q9NP77	194 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	GMPR2	Q9P2T1	348 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	SERTAD3	Q9UJW9	196 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	TMPRSS11E	Q9UL52	423 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	ZNF236	Q9UL36	1845 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	ICE1	Q9Y2F5	2266 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	SCN2B	O60939	215 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	JRK	O75564	520 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	ENO2	P09104	434 aa	Predicted RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	MTHFD2	P13995	350 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	SUZ12	Q15022	739 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	CNTN4	Q8IWV2	1026 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	ARL14	Q8N4G2	192 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	SPAG4	Q9NPE6	437 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568	KCMF1	Q9P0J7	381 aa		12.99	□□□□□ -0.33
DDR1-225	ENST00000376568		A0A1B0GTW7	788 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	PLRG1	O43660	514 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	UBXN7	O94888	489 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	ADAR	P55265	1226 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	SKP1	P63208	163 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	NDUFA9	Q16795	377 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	TMEM52B	Q4KMG9	183 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	COMMD6	Q7Z4G1	85 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	PIGW	Q7Z7B1	504 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	CADM2	Q8N3J6	435 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	RP9	Q8TA86	221 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	AGAP11	Q8TF27	550 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	GFM1	Q96RP9	751 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	MKL2	Q9ULH7	1088 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	DFNA5	O60443	496 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	REM1	O75628	298 aa		12.98	□□□□□ -0.33
DDR1-225	ENST00000376568	CCNDBP1	O95273	360 aa		12.98	□□□□□ -0.33

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