RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 PRSS51A0A1B0GVH4 220 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 A0A1B0GVM2 712 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 DPPA5A6NC42 116 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 ZNF840PA6NDX5 716 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 CAPN8A6NHC0 703 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 BBIP1A8MTZ0 92 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 BTN3A1O00481 513 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 TRIM38O00635 465 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 UBDO15205 165 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 INSIG1O15503 277 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 KDELR3O43731 214 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 KERAO60938 352 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 SKAP2O75563 359 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 BCAS2O75934 225 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 SORBS2O94875 1100 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 GALTP07902 379 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 RHOCP08134 193 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 HMBSP08397 361 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 LINGO3P0C6S8 592 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 UQCRBP14927 111 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 EN2P19622 333 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 PEX2P28328 305 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 CDC25CP30307 473 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 PTGER1P34995 402 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 ATP5C1P36542 298 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 MRPL19P49406 292 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 TUFMP49411 452 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 GATMP50440 423 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 THOP1P52888 689 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 ARPP19P56211 112 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 ATP6V0D1P61421 351 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 HERVK_113P63132 956 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 TIAL1Q01085 375 aaKnown RBP eCLIP4.67□□□□□ -1.66
USP48-202ENST00000374730 ART3Q13508 389 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 PEX6Q13608 980 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 RAB32Q13637 225 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 CEACAM7Q14002 265 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 FLOT2Q14254 428 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 FASTKQ14296 549 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 GALNT3Q14435 633 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 SEMA3AQ14563 771 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 GPNMBQ14956 572 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 TAF1AQ15573 450 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 UNC50Q53HI1 259 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 SFT2D3Q587I9 215 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 COQ5Q5HYK3 327 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 CEP78Q5JTW2 689 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 TCHHL1Q5QJ38 904 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 RARS2Q5T160 578 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 INTS11Q5TA45 600 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 DEPDC1Q5TB30 811 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 RNF220Q5VTB9 566 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 REP15Q6BDI9 236 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 OR52E8Q6IFG1 317 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 C11orf87Q6NUJ2 197 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 C8orf82Q6P1X6 216 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 TMEM154Q6P9G4 183 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 KIRREL2Q6UWL6 708 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 CYHR1Q6ZMK1 362 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 KDELC2Q7Z4H8 507 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 SDCCAG8Q86SQ7 713 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 PIM3Q86V86 326 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 IZUMO1Q8IYV9 350 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 LGI2Q8N0V4 545 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 CLYBLQ8N0X4 340 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 SPATA6LQ8N4H0 392 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 PTGR2Q8N8N7 351 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 DBF4BQ8NFT6 615 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 OR13C4Q8NGS5 318 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 OR4L1Q8NH43 312 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 PPP1R35Q8TAP8 253 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 HMGCLL1Q8TB92 370 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 RAET1EQ8TD07 263 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 BLOC1S5Q8TDH9 187 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 GDPD5Q8WTR4 605 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 UCMAQ8WVF2 138 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 LRTOMTQ8WZ04 291 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 LPGAT1Q92604 370 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 PTERQ96BW5 349 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 MOCOSQ96EN8 888 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 SGF29Q96ES7 293 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 DUS3LQ96G46 650 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 CDKN2AIPNLQ96HQ2 116 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 B3GALT6Q96L58 329 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 RIPOR3Q96MK2 946 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 PRICKLE1Q96MT3 831 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 TRAPPC9Q96Q05 1148 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 SNX18Q96RF0 628 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 ATOH8Q96SQ7 321 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 CYP2S1Q96SQ9 504 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 DDX50Q9BQ39 737 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 C19orf43Q9BQ61 176 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 LBHD1Q9BQE6 289 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 SLC25A23Q9BV35 468 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 CINPQ9BW66 212 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 ERVK-6Q9BXR3 956 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 TDRD1Q9BXT4 1180 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 MRPL1Q9BYD6 325 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 DERL2Q9GZP9 239 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 ALG9Q9H6U8 611 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms