RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 TXLNGQ9NUQ3 528 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 DHCR7Q9UBM7 475 aaKnown RBP14.3□□□□□ -0.12
HSPG2-201ENST00000374673 WDFY3Q8IZQ1 3526 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 TEX51A0A1B0GUA7 166 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 URADA6NGE7 173 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 MEN1O00255 615 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 ESRRBO95718 433 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 TBX6O95947 436 aaPredicted RBP14.29□□□□□ -0.12
HSPG2-201ENST00000374673 STATHP02808 62 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 SERPIND1P05546 499 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 KLK3P07288 261 aaPredicted RBP14.29□□□□□ -0.12
HSPG2-201ENST00000374673 SERPINB5P36952 375 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 PIK3CBP42338 1070 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 ABHD18Q0P651 414 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 ZRSR2Q15696 482 aaKnown RBP14.29□□□□□ -0.12
HSPG2-201ENST00000374673 ADPRMQ3LIE5 342 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 C10orf62Q5T681 223 aaPredicted RBP14.29□□□□□ -0.12
HSPG2-201ENST00000374673 ADNP2Q6IQ32 1131 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 GPRIN3Q6ZVF9 776 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 SYVN1Q86TM6 617 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 NUDCD3Q8IVD9 361 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 KCT2Q8NC54 265 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 NKD1Q969G9 470 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 MACROD1Q9BQ69 325 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 LHX9Q9NQ69 397 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 NKIRAS1Q9NYS0 192 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 SLC22A7Q9Y694 548 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 NCOR2Q9Y618 2525 aa14.29□□□□□ -0.12
HSPG2-201ENST00000374673 UBFD1O14562 309 aaKnown RBP14.28□□□□□ -0.12
HSPG2-201ENST00000374673 FOXS1O43638 330 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 ONECUT2O95948 504 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 ENO1P06733 434 aaKnown RBP14.28□□□□□ -0.12
HSPG2-201ENST00000374673 CCNYL3P0C7X3 344 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 PCNAP12004 261 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 AGXTP21549 392 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 HPDP32754 393 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-201ENST00000374673 STAT5AP42229 794 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 CCR10P46092 362 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 ATP1A2P50993 1020 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 WDR4P57081 412 aaKnown RBP14.28□□□□□ -0.12
HSPG2-201ENST00000374673 STXBP1P61764 594 aaKnown RBP14.28□□□□□ -0.12
HSPG2-201ENST00000374673 PHEXP78562 749 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 GALNT1Q10472 559 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-201ENST00000374673 HHATQ5VTY9 493 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 PRMT9Q6P2P2 845 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 ZCCHC23Q6ZST2 131 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 PROSER1Q86XN7 944 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 CACNA2D3Q8IZS8 1091 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 AFAP1L2Q8N4X5 818 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 KCNE4Q8WWG9 221 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 ZCCHC14Q8WYQ9 949 aaKnown RBP14.28□□□□□ -0.12
HSPG2-201ENST00000374673 CCT6BQ92526 530 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 MS4A8Q9BY19 250 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 SLC29A3Q9BZD2 475 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 MID1IP1Q9NPA3 183 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 PSD3Q9NYI0 1048 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 NDOR1Q9UHB4 597 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 PADI1Q9ULC6 663 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 PPT2Q9UMR5 302 aa14.28□□□□□ -0.12
HSPG2-201ENST00000374673 MRPS2Q9Y399 296 aaKnown RBP14.28□□□□□ -0.12
HSPG2-201ENST00000374673 WDR91A4D1P6 747 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 LRIT2A6NDA9 550 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 DYNC1I1O14576 645 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 NSA2O95478 260 aaKnown RBP14.27□□□□□ -0.13
HSPG2-201ENST00000374673 CAPN1P07384 714 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 SMIM10L1P0DMW3 83 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 ITGAXP20702 1163 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 ALAS2P22557 587 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 EIF2S3P41091 472 aaKnown RBP14.27□□□□□ -0.13
HSPG2-201ENST00000374673 SNRPNP63162 240 aaKnown RBP14.27□□□□□ -0.13
HSPG2-201ENST00000374673 DCDP81605 110 aaKnown RBP14.27□□□□□ -0.13
HSPG2-201ENST00000374673 CLN3Q13286 438 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 RCN2Q14257 317 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 HERC3Q15034 1050 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 TGIF1Q15583 401 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 TOR1AIP1Q5JTV8 583 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 C1orf189Q5VU69 101 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 FRG2Q64ET8 278 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 NIPAL1Q6NVV3 410 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 ABHD13Q7L211 337 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 CDYL2Q8N8U2 506 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 KDF1Q8NAX2 398 aaPredicted RBP14.27□□□□□ -0.13
HSPG2-201ENST00000374673 HUS1BQ8NHY5 278 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 ZCCHC10Q8TBK6 192 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 UTP15Q8TED0 518 aaKnown RBP14.27□□□□□ -0.13
HSPG2-201ENST00000374673 MR1Q95460 341 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 GAL3ST3Q96A11 431 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 MS4A6EQ96DS6 147 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 CMTM7Q96FZ5 175 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 SMIM10Q96HG1 83 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 FRG2BQ96QU4 278 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 DPH1Q9BZG8 443 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 AICDAQ9GZX7 198 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 AKIRIN1Q9H9L7 192 aaPredicted RBP14.27□□□□□ -0.13
HSPG2-201ENST00000374673 MLXIPLQ9NP71 852 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 DMRT3Q9NQL9 472 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 CDC14AQ9UNH5 594 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 SNX6Q9UNH7 406 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 SCN3AQ9NY46 2000 aa14.27□□□□□ -0.13
HSPG2-201ENST00000374673 AKAP13Q12802 2813 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms