RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 HIST1H2AJQ99878 128 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 H2AFJQ9BTM1 129 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 TPK1Q9H3S4 243 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 UGT2A1Q9Y4X1 527 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 GMPPBQ9Y5P6 360 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 C2orf16Q68DN1 1984 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 TRBV5-3A0A0A0MS03 114 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 EPOPA6NHQ4 379 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 CLDN24A6NM45 220 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 CPSF6Q16630 551 aaKnown RBP eCLIP16.31■□□□□ 0.2
PHF1-202ENST00000374516 CEP68Q76N32 757 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 ZDHHC21Q8IVQ6 265 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 LIX1Q8N485 282 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 RASGEF1AQ8N9B8 481 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 APOL4Q9BPW4 351 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 SLC12A9Q9BXP2 914 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 PBX4Q9BYU1 374 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 HOXD1Q9GZZ0 328 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 C1orf109Q9NX04 203 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 KLHL42Q9P2K6 505 aa16.31■□□□□ 0.2
PHF1-202ENST00000374516 TBC1D3BA6NDS4 549 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 PABPN1LA6NDY0 278 aaKnown RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 FAM220BPB1ANY3 271 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 FAM47E-STBD1D6RA91 191 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 SNPHO15079 494 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 RGS14O43566 566 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 TSPAN6O43657 245 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 EPORP19235 508 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 TGFBR2P37173 567 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 MAGEA2P43356 314 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 ABRQ12979 859 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 ZNF234Q14588 700 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 NDUFA5Q16718 116 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 HNRNPA1L2Q32P51 320 aaKnown RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 KDM4DQ6B0I6 523 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 GALNT13Q8IUC8 556 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 KIAA1958Q8N8K9 716 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 POC5Q8NA72 575 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 POP5Q969H6 163 aaKnown RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 GLYATL1Q969I3 302 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 FAM120BQ96EK7 910 aaKnown RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 GABARAPL1Q9H0R8 117 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 ATG10Q9H0Y0 220 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 DCSTAMPQ9H295 470 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 MMP27Q9H306 513 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 CLMPQ9H6B4 373 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 EPS8L2Q9H6S3 715 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 ZFP14Q9HCL3 533 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 CCNB1IP1Q9NPC3 277 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 K7ESM1 405 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 WNT9AO14904 365 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 SPINT1O43278 529 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 MRPS14O60783 128 aaKnown RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 ULK1O75385 1050 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 KCNK2O95069 426 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 LCKP06239 509 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 PREPP48147 710 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 SEPHS1P49903 392 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 ARHGDIAP52565 204 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 MAD2L1Q13257 205 aaPredicted RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 ZNF181Q2M3W8 571 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 ZNF404Q494X3 552 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 C6orf183Q5T699 404 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 STEAP3Q658P3 488 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 TSPYL5Q86VY4 417 aaPredicted RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 RAVER1Q8IY67 606 aaKnown RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 UBTD2Q8WUN7 234 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 ARRDC3Q96B67 414 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 TBC1D20Q96BZ9 403 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 SAMD11Q96NU1 681 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 SLC32A1Q9H598 525 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 ZNF490Q9ULM2 529 aaPredicted RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 NDRG4Q9ULP0 352 aaKnown RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 TESMINQ9Y4I5 508 aa16.3■□□□□ 0.2
PHF1-202ENST00000374516 TCF20Q9UGU0 1960 aaKnown RBP16.3■□□□□ 0.2
PHF1-202ENST00000374516 OR2A25A4D2G3 310 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 SAGE2PA6NJ88 616 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 PSMD11O00231 422 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 TAF4O00268 1085 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 TBX1O43435 398 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 FAM20BO75063 409 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 PRNPP04156 253 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 C8GP07360 202 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 GNPDA1P46926 289 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 TUBA1BP68363 451 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 IFITM2Q01629 132 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 TMEM115Q12893 351 aaPredicted RBP16.29■□□□□ 0.2
PHF1-202ENST00000374516 KCNC3Q14003 757 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 MAD2L1BPQ15013 274 aaPredicted RBP16.29■□□□□ 0.2
PHF1-202ENST00000374516 PTCHD3Q3KNS1 767 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 LRIT3Q3SXY7 679 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 PLEKHS1Q5SXH7 462 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 TUBA3EQ6PEY2 450 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 TUBA1AQ71U36 451 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 CHCHD4Q8N4Q1 142 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 TTC29Q8NA56 475 aaPredicted RBP16.29■□□□□ 0.2
PHF1-202ENST00000374516 ASZ1Q8WWH4 475 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 UBE2FQ969M7 185 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 NTMT1Q9BV86 223 aa16.29■□□□□ 0.2
PHF1-202ENST00000374516 SLC22A14Q9Y267 594 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms