RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ZNF697Q5TEC3 545 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CASC4Q6P4E1 433 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 KDELC1Q6UW63 502 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 USP45Q70EL2 814 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 BHLHA9Q7RTU4 235 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CTU1Q7Z7A3 348 aaKnown RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 KRT73Q86Y46 540 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 TBC1D19Q8N5T2 526 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ATG16L2Q8NAA4 619 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 GOT1L1Q8NHS2 421 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 AGR3Q8TD06 166 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 UBASH3BQ8TF42 649 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 DEPDC1BQ8WUY9 529 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ARNTL2Q8WYA1 636 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 SLC38A4Q969I6 547 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ROPN1LQ96C74 230 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PPP1R36Q96LQ0 422 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 TMEM68Q96MH6 324 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 UGT2B28Q9BY64 529 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 TTYH1Q9H313 450 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ELOVL6Q9H5J4 265 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ERVK13-1Q9NX77 482 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ERVK-18Q9QC07 812 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ENTPD4Q9Y227 616 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 SLC22A7Q9Y694 548 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 hCG_1807616A0A1W2PRN6 198 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 KRBOX1C9JBD0 128 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 NME4O00746 187 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PRSS23O95084 383 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PGAM1P18669 254 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 TFEBP19484 476 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PCSK1P29120 753 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 RAB25P57735 213 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 SESN2P58004 480 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PRKAA1Q13131 559 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CAMK1Q14012 370 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 SMAD2Q15796 467 aaKnown RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 MICAQ29983 383 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 GPR158Q5T848 1215 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 RGMBQ6NW40 437 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PRMT9Q6P2P2 845 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PDZD4Q76G19 769 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 RHOUQ7L0Q8 258 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 RBM23Q86U06 439 aaKnown RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 C12orf40Q86WS4 652 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 METTL23Q86XA0 190 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CLEC4FQ8N1N0 589 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ZNF555Q8NEP9 628 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 KBTBD8Q8NFY9 601 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 SLC13A3Q8WWT9 602 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ASB15Q8WXK1 588 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 KIAA1191Q96A73 305 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 SMARCD1Q96GM5 515 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 MBOAT4Q96T53 435 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ACOX2Q99424 681 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 RTP3Q9BQQ7 232 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 SLC30A2Q9BRI3 323 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 SLC25A23Q9BV35 468 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 COLEC11Q9BWP8 271 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 GATA5Q9BWX5 397 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 MUC13Q9H3R2 512 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 DUSP21Q9H596 190 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CSNK1G1Q9HCP0 422 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ASAH2Q9NR71 780 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PIH1D1Q9NWS0 290 aaKnown RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 DDIT4Q9NX09 232 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 USE1Q9NZ43 259 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ABT1Q9ULW3 272 aaKnown RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 GTF2A1LQ9UNN4 478 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 SLC22A23A1A5C7 686 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 FAM170BA6NMN3 283 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 KCNK1O00180 336 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 ARPC2O15144 300 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 AIREO43918 545 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 DLX3O60479 287 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 F9P00740 461 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 IFNA7P01567 189 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 CHRNGP07510 517 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SNRPB2P08579 225 aaKnown RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 ACSM4P0C7M7 580 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 ITGAMP11215 1152 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 MGAT1P26572 445 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 RYKP34925 604 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 RENBPP51606 427 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 TPI1P60174 286 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 DGCR6Q14129 220 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 ETFDHQ16134 617 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 CYP51A1Q16850 503 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PAN2Q504Q3 1202 aaKnown RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 OTUD3Q5T2D3 398 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SLC6A19Q695T7 634 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SULT1C3Q6IMI6 304 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PAMR1Q6UXH9 720 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PID1Q7Z2X4 250 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 TRIM48Q8IWZ4 208 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 BTN2A2Q8WVV5 523 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 MYLPFQ96A32 169 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PDLIM5Q96HC4 596 aaKnown RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SORCS2Q96PQ0 1159 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 ACBD6Q9BR61 282 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms