RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ARHGAP10A1A4S6 786 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 E7EQ34 232 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 CLOCKO15516 846 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 TPST1O60507 370 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 FTH1P19P0C7X4 201 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 MYF6P23409 242 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 PAX7P23759 505 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 NEK2P51955 445 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 ACSM2AQ08AH3 577 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 PAGE2BQ5JRK9 111 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 ACSM2BQ68CK6 577 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 FAM124AQ86V42 546 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 CACUL1Q86Y37 369 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 TRAPPC5Q8IUR0 188 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 OR8J2Q8NGG1 315 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 OR2L2Q8NH16 312 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 OR10A6Q8NH74 314 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 SETD7Q8WTS6 366 aaKnown RBP13.54□□□□□ -0.24
LDB3-204ENST00000372066 CXorf40BQ96DE9 158 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 FAM120BQ96EK7 910 aaKnown RBP13.54□□□□□ -0.24
LDB3-204ENST00000372066 MED8Q96G25 268 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 REXO5Q96IC2 774 aaKnown RBP13.54□□□□□ -0.24
LDB3-204ENST00000372066 APOLD1Q96LR9 279 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 RNF145Q96MT1 663 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 RDH12Q96NR8 316 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 TSSK3Q96PN8 268 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 ADI1Q9BV57 179 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 SPATA9Q9BWV2 254 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 SIRT5Q9NXA8 310 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 OAZ3Q9UMX2 235 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 MYRFQ9Y2G1 1151 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 EVPLLA8MZ36 301 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 CXCR6O00574 342 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 ACOX3O15254 700 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 BCAT2O15382 392 aaPredicted RBP13.54□□□□□ -0.24
LDB3-204ENST00000372066 H6PDO95479 791 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 SLC16A8O95907 504 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 HPRP00739 348 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 FESP07332 822 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 HLA-EP13747 358 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 CD22P20273 847 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 PPIBP23284 216 aaKnown RBP13.54□□□□□ -0.24
LDB3-204ENST00000372066 PBLDP30039 288 aaPredicted RBP13.54□□□□□ -0.24
LDB3-204ENST00000372066 NR1H2P55055 460 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 MERTKQ12866 999 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 LAPTM5Q13571 262 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 KCTD21Q4G0X4 260 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 FOXB2Q5VYV0 432 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 MED27Q6P2C8 311 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 ERICH5Q6P6B1 374 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 ADAMTSL4Q6UY14 1074 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 CAMKMTQ7Z624 323 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 EID3Q8N140 333 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 PHC3Q8NDX5 983 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 OR9A1PQ8NGU1 263 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 CLHC1Q8NHS4 586 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 ADAMTS14Q8WXS8 1223 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 C11orf24Q96F05 449 aaPredicted RBP13.54□□□□□ -0.24
LDB3-204ENST00000372066 SGPP1Q9BX95 441 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 OR2AG1Q9H205 316 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 GAREM1Q9H706 876 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 IL21RQ9HBE5 538 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 SGK2Q9HBY8 427 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 SMPD3Q9NY59 655 aaPredicted RBP13.54□□□□□ -0.24
LDB3-204ENST00000372066 PPT2Q9UMR5 302 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 LHX6Q9UPM6 363 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 TSC22D4Q9Y3Q8 395 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 PCDHB14Q9Y5E9 798 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 DNMT3AQ9Y6K1 912 aaPredicted RBP13.54□□□□□ -0.24
LDB3-204ENST00000372066 AP1M2Q9Y6Q5 423 aa13.54□□□□□ -0.24
LDB3-204ENST00000372066 FAM208BQ5VWN6 2430 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 ASPMQ8IZT6 3477 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 TNRC6BQ9UPQ9 1833 aaKnown RBP13.53□□□□□ -0.24
LDB3-204ENST00000372066 MGAT4DA6NG13 374 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 GPR89AB7ZAQ6 455 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 H0YAE9 185 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 TAF4O00268 1085 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 FOXE1O00358 373 aaPredicted RBP13.53□□□□□ -0.24
LDB3-204ENST00000372066 RFXANKO14593 260 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 AHCYL1O43865 530 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 GPR89BP0CG08 455 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 HOXB3P14651 431 aaPredicted RBP13.53□□□□□ -0.24
LDB3-204ENST00000372066 TEAD1P28347 426 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 RPL3P39023 403 aaKnown RBP13.53□□□□□ -0.24
LDB3-204ENST00000372066 TUBA4AP68366 448 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 PHEXP78562 749 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 EPS8Q12929 822 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 SLC36A3Q495N2 470 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 SLCO4C1Q6ZQN7 724 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 SERPINA11Q86U17 422 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 SVOPLQ8N434 492 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 FAM110BQ8TC76 370 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 SNX19Q92543 992 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 FIG4Q92562 907 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 UBE2E3Q969T4 207 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 FAM162AQ96A26 154 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 SDCCAG3Q96C92 435 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 RMND5BQ96G75 393 aaPredicted RBP13.53□□□□□ -0.24
LDB3-204ENST00000372066 COX14Q96I36 57 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 HIC2Q96JB3 615 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms