RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ESAMQ96AP7 390 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 ATOH8Q96SQ7 321 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 CYTH2Q99418 400 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 AIF1LQ9BQI0 150 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 SLC6A16Q9GZN6 736 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 ZNF160Q9HCG1 818 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 HCN3Q9P1Z3 774 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 COPG2Q9UBF2 871 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 MTRF1LQ9UGC7 380 aaKnown RBP17.92■□□□□ 0.46
CKS1B-203ENST00000368439 MKL2Q9ULH7 1088 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 IGHV1-45A0A0A0MS14 117 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 KLHL41O60662 606 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 GALR3O60755 368 aaPredicted RBP17.91■□□□□ 0.46
CKS1B-203ENST00000368439 DNAJB6O75190 326 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 RDH16O75452 317 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 B3GALT4O96024 378 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 SMIM10L1P0DMW3 83 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 C1GALT1C1LP0DN25 315 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 GNAZP19086 355 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 XCR1P46094 333 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 HSPA7P48741 367 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 KCNC4Q03721 635 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 CDC16Q13042 620 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 BMPR2Q13873 1038 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 HERC3Q15034 1050 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 FAAH2Q6GMR7 532 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 IGFL2Q6UWQ7 119 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 RAPH1Q70E73 1250 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 NDUFAF7Q7L592 441 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 CENPLQ8N0S6 344 aaPredicted RBP17.91■□□□□ 0.46
CKS1B-203ENST00000368439 TBC1D19Q8N5T2 526 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 AMER2Q8N7J2 671 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 UTP15Q8TED0 518 aaKnown RBP17.91■□□□□ 0.46
CKS1B-203ENST00000368439 IFT81Q8WYA0 676 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 PNPLA2Q96AD5 504 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 MRRFQ96E11 262 aaKnown RBP17.91■□□□□ 0.46
CKS1B-203ENST00000368439 SMIM10Q96HG1 83 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 VPS50Q96JG6 964 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 MFRPQ9BY79 579 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 VN1R1Q9GZP7 353 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 LHPPQ9H008 270 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 CLMPQ9H6B4 373 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 ALG9Q9H6U8 611 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 GPRC5BQ9NZH0 403 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 ASB1Q9Y576 335 aa17.91■□□□□ 0.46
CKS1B-203ENST00000368439 C4orf51C9J302 202 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 PCDH17O14917 1159 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 IPO13O94829 963 aaKnown RBP17.9■□□□□ 0.46
CKS1B-203ENST00000368439 ALPPP05187 535 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 LTA4HP09960 611 aaKnown RBP17.9■□□□□ 0.46
CKS1B-203ENST00000368439 ALOX12P18054 663 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 EPORP19235 508 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 TFEBP19484 476 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 PHBP35232 272 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 IRF9Q00978 393 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 EEF1A2Q05639 463 aaKnown RBP17.9■□□□□ 0.46
CKS1B-203ENST00000368439 PCOLCEQ15113 449 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 MROH9Q5TGP6 573 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 CEP128Q6ZU80 1094 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 TRPV3Q8NET8 790 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 OR5T3Q8NGG3 340 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 STAG3L4Q8TBR4 150 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 NXNL1Q96CM4 212 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 THOC3Q96J01 351 aaKnown RBP17.9■□□□□ 0.46
CKS1B-203ENST00000368439 FMO2Q99518 471 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 ZNF700Q9H0M5 742 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 TSPYL1Q9H0U9 437 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 KLHL31Q9H511 634 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 NMRAL1Q9HBL8 299 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 LANCL2Q9NS86 450 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 DNAJC11Q9NVH1 559 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 WWOXQ9NZC7 414 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 RNF112Q9ULX5 631 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 PLAAQ9Y263 795 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 CNTRLQ7Z7A1 2325 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 CPAMD8Q8IZJ3 1885 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 FLNCQ14315 2725 aa17.9■□□□□ 0.46
CKS1B-203ENST00000368439 OR2W5A6NFC9 320 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 ZNF860A6NHJ4 632 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 STK16O75716 305 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 TBX6O95947 436 aaPredicted RBP17.89■□□□□ 0.45
CKS1B-203ENST00000368439 ALDOAP04075 364 aaKnown RBP17.89■□□□□ 0.45
CKS1B-203ENST00000368439 SERPIND1P05546 499 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 C2P06681 752 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 CYC1P08574 325 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 ZNF888P0CJ79 500 aaPredicted RBP17.89■□□□□ 0.45
CKS1B-203ENST00000368439 MTHFD2P13995 350 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 CXCR2P25025 360 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 RGS1Q08116 209 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 E2F2Q14209 437 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 RBBP5Q15291 538 aaKnown RBP17.89■□□□□ 0.45
CKS1B-203ENST00000368439 PLEKHN1Q494U1 663 aaPredicted RBP17.89■□□□□ 0.45
CKS1B-203ENST00000368439 DEFB134Q4QY38 66 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 TBC1D1Q86TI0 1168 aaPredicted RBP17.89■□□□□ 0.45
CKS1B-203ENST00000368439 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.89■□□□□ 0.45
CKS1B-203ENST00000368439 CEP112Q8N8E3 955 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 KCTD4Q8WVF5 259 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 PSMF1Q92530 271 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 WDR34Q96EX3 536 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 CAPS2Q9BXY5 557 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms