RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NBEAQ8NFP9 2946 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 ANKRD11Q6UB99 2663 aaPredicted RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 WDFY3Q8IZQ1 3526 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 KNL1Q8NG31 2342 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 A0A1W2PQF6 199 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 TCRBV21S2A2A0A5A6 115 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 TBC1D3BA6NDS4 549 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 METTL15A6NJ78 407 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 UPK3BL1B0FP48 263 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 UPK3BL2E5RIL1 263 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 INSIG1O15503 277 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 KDELR3O43731 214 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 PRMT3O60678 531 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 SEC22BO75396 215 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 UPK1BO75841 260 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 GSNP06396 782 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 PCNAP12004 261 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 ENGP17813 658 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 GABRG2P18507 467 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 SPINK2P20155 84 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 ITPKAP23677 461 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 MAPK1P28482 360 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 DNAJA1P31689 397 aaKnown RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 CLCN7P51798 805 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 MAPK10P53779 464 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 CLDN8P56748 225 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 IL5RAQ01344 420 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 IFITM3Q01628 133 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 CACNG1Q06432 222 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 FOXC1Q12948 553 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 RAPSNQ13702 412 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 TBCEQ15813 527 aaPredicted RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 NPTX1Q15818 432 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 PROX2Q3B8N5 592 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 UAP1L1Q3KQV9 507 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 GGTA1PQ4G0N0 100 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 RFTN2Q52LD8 501 aaPredicted RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 LYPLAL1Q5VWZ2 237 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 FAM219BQ5XKK7 198 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 OR2T5Q6IEZ7 315 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 SBSNQ6UWP8 590 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 ARMCX6Q7L4S7 300 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 B3GNT8Q7Z7M8 397 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 SERPINA11Q86U17 422 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 FAM86B1Q8N7N1 296 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 GALNT6Q8NCL4 622 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 DEFB124Q8NES8 71 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 OR52B6Q8NGF0 335 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 OR2T29Q8NH02 315 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 GLMNQ92990 594 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 SLC38A4Q969I6 547 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 FAM120BQ96EK7 910 aaKnown RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 ITCHQ96J02 903 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 RPL10LQ96L21 214 aaKnown RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 CDK5RAP1Q96SZ6 601 aaKnown RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 CINPQ9BW66 212 aaPredicted RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 KLF16Q9BXK1 252 aaPredicted RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 ACOT13Q9NPJ3 140 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 TLR8Q9NR97 1041 aaKnown RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 SLC25A37Q9NYZ2 338 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 CCDC59Q9P031 241 aaKnown RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 UBA2Q9UBT2 640 aaPredicted RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 IFT52Q9Y366 437 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 TESMINQ9Y4I5 508 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 SPO11Q9Y5K1 396 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 MAGED1Q9Y5V3 778 aaPredicted RBP11.13□□□□□ -0.63
USF1-201ENST00000368019 ATRXP46100 2492 aa11.13□□□□□ -0.63
USF1-201ENST00000368019 OR2A25A4D2G3 310 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 E5RI56 91 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 F5H5T6 163 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 EIF3FO00303 357 aaPredicted RBP11.12□□□□□ -0.63
USF1-201ENST00000368019 RGS13O14921 159 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 FFAR2O15552 330 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 NUAK1O60285 661 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 NOBOXO60393 691 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 TLR5O60602 858 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 NIPSNAP2O75323 286 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 TBX18O95935 607 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 GSTT2P0CG29 244 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 GSTT2BP0CG30 244 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 SLC2A4P14672 509 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 TACR2P21452 398 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 PTX3P26022 381 aaPredicted RBP11.12□□□□□ -0.63
USF1-201ENST00000368019 OR1E1P30953 314 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 NTSR1P30989 418 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 MC4RP32245 332 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 TGFBR2P37173 567 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 ETV6P41212 452 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 GSSP48637 474 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 MASP1P48740 699 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 TRPC1P48995 793 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 DGKQP52824 942 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 CDH4P55283 916 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 RPL38P63173 70 aaKnown RBP11.12□□□□□ -0.63
USF1-201ENST00000368019 PRKCDQ05655 676 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 VAC14Q08AM6 782 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 PTPRCAPQ14761 206 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 MAD2L1BPQ15013 274 aaPredicted RBP11.12□□□□□ -0.63
USF1-201ENST00000368019 DUOXA1Q1HG43 343 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms