RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 NECTIN3Q9NQS3 549 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 TBCCD1Q9NVR7 557 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 SLCO3A1Q9UIG8 710 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 GSTM3P21266 225 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 CDKN1CP49918 316 aaPredicted RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 AFF1P51825 1210 aaKnown RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 CLDN8P56748 225 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 RAB8AP61006 207 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 ERVK-21P61565 698 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 TOMM20Q15388 145 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 CTC1Q2NKJ3 1217 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 PLEKHS1Q5SXH7 462 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 ADNP2Q6IQ32 1131 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 SLC30A6Q6NXT4 461 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 PGM2L1Q6PCE3 622 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 ARL9Q6T311 187 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 ZNF534Q76KX8 674 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 LRRTM4Q86VH4 590 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 JAZF1Q86VZ6 243 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 HDDC3Q8N4P3 179 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 DTWD1Q8N5C7 304 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 ZBTB8BQ8NAP8 495 aaPredicted RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 GRPEL2Q8TAA5 225 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 GSDMCQ9BYG8 508 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 REEP4Q9H6H4 257 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 UTS2RQ9UKP6 389 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 FAM25EA8MYX2 175 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 DNAJB5O75953 348 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 OAZ2O95190 189 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 HPRP00739 348 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 IGFBP4P22692 258 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 DCDC1P59894 354 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 CD47Q08722 323 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 NPRL3Q12980 569 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 SP140Q13342 867 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 WSCD2Q2TBF2 565 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 GTDC1Q4AE62 458 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 KANK2Q63ZY3 851 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 KDELC1Q6UW63 502 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 ZNF517Q6ZMY9 492 aaPredicted RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 FAM46DQ8NEK8 389 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 OR9A1PQ8NGU1 263 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 ZBED3Q96IU2 234 aaPredicted RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 SEZ6LQ9BYH1 1024 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 CERS4Q9HA82 394 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 PAK1IP1Q9NWT1 392 aaPredicted RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 MS4A12Q9NXJ0 267 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 TCRBV5S1A1TA0A578 114 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 BOLA2-SMG1P6H3BVE0 249 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 TSPAN6O43657 245 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 PRDX3P30048 256 aaKnown RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 TGFBR2P37173 567 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 CLK3P49761 638 aaKnown RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 C18orf21Q32NC0 220 aaPredicted RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 SNAP47Q5SQN1 464 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 LETMD1Q6P1Q0 360 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 ARHGAP12Q8IWW6 846 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 SCML4Q8N228 414 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 KLHL36Q8N4N3 616 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 HERVK_113Q902F9 699 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 BIRC8Q96P09 236 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 GPN1Q9HCN4 374 aaPredicted RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 TAS2R9Q9NYW1 312 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 CCDC59Q9P031 241 aaKnown RBP11.09□□□□□ -0.63
RD3-201ENST00000367002 TNFRSF10DQ9UBN6 386 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 ACTL7AQ9Y615 435 aa11.09□□□□□ -0.63
RD3-201ENST00000367002 OR6C70A6NIJ9 312 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 FAM170BA6NMN3 283 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 SLC1A7O00341 560 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 GMFGO60234 142 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 CDH11P55287 796 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 CD83Q01151 205 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 ALG11Q2TAA5 492 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 ATAT1Q5SQI0 421 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 C10orf62Q5T681 223 aaPredicted RBP11.08□□□□□ -0.64
RD3-201ENST00000367002 LIPJQ5W064 366 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 LARP4Q71RC2 724 aaKnown RBP eCLIP11.08□□□□□ -0.64
RD3-201ENST00000367002 TAF8Q7Z7C8 310 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 VTCN1Q7Z7D3 282 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 PIANPQ8IYJ0 282 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 C5orf34Q96MH7 638 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 FAM129BQ96TA1 746 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 HERC2P3Q9BVR0 1158 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 BOCQ9BWV1 1114 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 TSSK6Q9BXA6 273 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 POLE4Q9NR33 117 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 SETD1AO15047 1707 aaKnown RBP11.08□□□□□ -0.64
RD3-201ENST00000367002 PENKP01210 267 aaPredicted RBP11.08□□□□□ -0.64
RD3-201ENST00000367002 CSF2P04141 144 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 HLA-DPB1P04440 258 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 TFPIP10646 304 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 ZNF24P17028 368 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 ZNF8P17098 575 aaPredicted RBP11.08□□□□□ -0.64
RD3-201ENST00000367002 ALAS2P22557 587 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 DOC2AQ14183 400 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 PTGES3Q15185 160 aaKnown RBP11.08□□□□□ -0.64
RD3-201ENST00000367002 PKDCCQ504Y2 493 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 C2orf27AQ580R0 203 aa11.08□□□□□ -0.64
RD3-201ENST00000367002 RTP2Q5QGT7 225 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms