RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 GARNL3Q5VVW2 1013 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 KAZNQ674X7 775 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 B3GNT6Q6ZMB0 384 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 C16orf47Q6ZP98 133 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 VN1R4Q7Z5H5 301 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 CCDC50Q8IVM0 306 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 ARMC10Q8N2F6 343 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 SIMC1Q8NDZ2 872 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 NFAM1Q8NET5 270 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 LINC01560Q8TB33 94 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 VAT1Q99536 393 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 TBL1YQ9BQ87 522 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZDHHC11Q9H8X9 412 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 C19orf25Q9UFG5 118 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 SLC2A6Q9UGQ3 507 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 PCYOX1Q9UHG3 505 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 TRHDEQ9UKU6 1024 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 KLF13Q9Y2Y9 288 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 MROH6A6NGR9 719 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 G3V3Y1 287 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 RDH16O75452 317 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 ANXA9O76027 345 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 GLSO94925 669 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 HRGP04196 525 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 OR56A5P0C7T3 313 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 ERGP11308 486 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 IL1RNP18510 177 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 ENDOUP21128 410 aaKnown RBP7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 MSNP26038 577 aaKnown RBP7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 PPIAP62937 165 aaKnown RBP7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 PLOD1Q02809 727 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 PTK6Q13882 451 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 FAM53BQ14153 422 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 POU6F1Q14863 301 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 NSDHLQ15738 373 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 CCDC38Q502W7 563 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 TBCELQ5QJ74 424 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 KCTD11Q693B1 232 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 LYPD4Q6UWN0 246 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZNF534Q76KX8 674 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 LDB1Q86U70 411 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 KLHDC8BQ8IXV7 354 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 OR5T3Q8NGG3 340 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 SMC6Q96SB8 1091 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 LPAR4Q99677 370 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 FAM118BQ9BPY3 351 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 UVRAGQ9P2Y5 699 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZNF223Q9UK11 482 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 TTC7AQ9ULT0 858 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 EDARQ9UNE0 448 aa7.9□□□□□ -1.14
HMGB1P39-201ENST00000366304 hCG_1818297A0A087WSY0 165 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 ZNF860A6NHJ4 632 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 CLCA1A8K7I4 914 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 H0YIG0 161 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 KLRC4-KLRK1H3BQV0 150 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 PRKNO60260 465 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 NSA2O95478 260 aaKnown RBP7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 B3GALT4O96024 378 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 IGHG3P01860 377 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 RPN2P04844 631 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 CYC1P08574 325 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 EPXP11678 715 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 NID1P14543 1247 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 CMPK1P30085 196 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 BCL6P41182 706 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 MARCKSL1P49006 195 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 AGTR2P50052 363 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 OR4D2P58180 307 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 ACTN3Q08043 901 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 FBXL19-AS1Q494R0 122 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 ANKRD20A2Q5SQ80 823 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 C1orf185Q5T7R7 199 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 ANKRD20A1Q5TYW2 823 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 LRRC38Q5VT99 294 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 ANKRD20A3Q5VUR7 823 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 HMBOX1Q6NT76 420 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 RBM43Q6ZSC3 357 aaKnown RBP7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 TRILQ7L0X0 811 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 PCGF5Q86SE9 256 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 PPFIBP2Q8ND30 876 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 PLPP5Q8NEB5 264 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 OR13J1Q8NGT2 312 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 SLC35G2Q8TBE7 412 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 ASZ1Q8WWH4 475 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 P3H4Q92791 437 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 RNASE6Q93091 150 aaKnown RBP7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 RAD51AP1Q96B01 352 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 ZNF778Q96MU6 729 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 RAB11FIP5Q9BXF6 653 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 TTTY12Q9BZ98 90 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 MRPS30Q9NP92 439 aaKnown RBP7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 KCMF1Q9P0J7 381 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 MARCH4Q9P2E8 410 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 SPRR3Q9UBC9 169 aa7.89□□□□□ -1.15
HMGB1P39-201ENST00000366304 A0A1B0GVC2 190 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 MAGEB17A8MXT2 336 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 QSOX1O00391 747 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 GOT2P00505 430 aaKnown RBP7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 SERPING1P05155 500 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms