RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 LRRC4CQ9HCJ2 640 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 AGPAT4Q9NRZ5 378 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 LANCL2Q9NS86 450 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 GRHL1Q9NZI5 618 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 HCN3Q9P1Z3 774 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 WHRNQ9P202 907 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 PTGFRNQ9P2B2 879 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ZFP69BQ9UJL9 534 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ERRFI1Q9UJM3 462 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 OARD1Q9Y530 152 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 TEX15Q9BXT5 2789 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CXorf49A8MYA2 514 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NDC80O14777 642 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 EIF3HO15372 352 aaKnown RBP eCLIP12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 OR1F1O43749 312 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GALR3O60755 368 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 RDH16O75452 317 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PIAS1O75925 651 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 DDAH2O95865 285 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 LDLRP01130 860 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 AHRP35869 848 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SLC6A12P48065 614 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 REEP5Q00765 189 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ILF2Q12905 390 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CDC16Q13042 620 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CSHL1Q14406 222 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 HERC3Q15034 1050 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PLAG1Q6DJT9 500 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ANKRD37Q7Z713 158 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 THOC6Q86W42 341 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 OR5T3Q8NGG3 340 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ZCCHC10Q8TBK6 192 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 VPS39Q96JC1 886 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CNDP1Q96KN2 507 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 OR1F2PQ96R84 312 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SLX1AQ9BQ83 275 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SLC6A16Q9GZN6 736 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PELI2Q9HAT8 420 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NSMCE4AQ9NXX6 385 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PLA2G3Q9NZ20 509 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SLC22A14Q9Y267 594 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CELSR2Q9HCU4 2923 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SCN2AQ99250 2005 aa12.89□□□□□ -0.35
TNFRSF1A-202ENST00000366159 IGHV3-20A0A0C4DH32 117 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NPEPPSL1A6NEC2 478 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NDUFS4O43181 175 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 RAD51CO43502 376 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 WFS1O76024 890 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 WDPCPO95876 746 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 EDN3P14138 238 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ALOX12P18054 663 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SSTR1P30872 391 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 HNMTP50135 292 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 AP2B1P63010 937 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 POU4F1Q01851 419 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NXPE4Q6UWF7 544 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 OR1N1Q8NGS0 311 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 UTP15Q8TED0 518 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CREB3L4Q8TEY5 395 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PYROXD1Q8WU10 500 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 METTL21AQ8WXB1 218 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ANP32BQ92688 251 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 RHBDF1Q96CC6 855 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TAAR6Q96RI8 345 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 AICDAQ9GZX7 198 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 COPG2Q9UBF2 871 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PLEKHB1Q9UF11 243 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 MTO1Q9Y2Z2 717 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CENPEQ02224 2701 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CRYBG3Q68DQ2 2970 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TRAV17A0A0B4J275 112 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 DYTNA2CJ06 578 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 FAM159BA6NKW6 160 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 MAGEB17A8MXT2 336 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SEC24DO94855 1032 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 B3GALT4O96024 378 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SAT1P21673 171 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GGT5P36269 586 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 AGTR2P50052 363 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GPX6P59796 221 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ARG2P78540 354 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TSNQ15631 228 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 INAQ16352 499 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 MINDY4Q4G0A6 757 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 MAATS1Q7Z4T9 603 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 M1APQ8TC57 530 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TSNARE1Q96NA8 513 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NPAS2Q99743 824 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PHACTR1Q9C0D0 580 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 DERL2Q9GZP9 239 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 DPH5Q9H2P9 285 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CLK4Q9HAZ1 481 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GPAMQ9HCL2 828 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 C19orf25Q9UFG5 118 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SLC5A6Q9Y289 635 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 KCNE2Q9Y6J6 123 aa12.88□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PABPN1LA6NDY0 278 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ZNF860A6NHJ4 632 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms