RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 FAM106AQ4KMX7 169 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 SH2D6Q7Z4S9 175 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 PCGF5Q86SE9 256 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 AMIGO1Q86WK6 493 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 CCDC60Q8IWA6 550 aaPredicted RBP3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 SLC39A11Q8N1S5 342 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 Q8NFD4 153 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 SEPT1Q8WYJ6 367 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 IL1RAPQ9NPH3 570 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 POLKQ9UBT6 870 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 COLEC10Q9Y6Z7 277 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 NPHP3Q7Z494 1330 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 A8MXE2 369 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 PRSS46E5RG02 174 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 F8VVB4 439 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 F8VWA3 439 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 PHF1O43189 567 aaPredicted RBP3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 KIF5CO60282 957 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 GALR3O60755 368 aaPredicted RBP3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 RECQL5O94762 991 aaPredicted RBP3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 MYOGP15173 224 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 LBPP18428 481 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 CDC25CP30307 473 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 SSTR1P30872 391 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 CRKLP46109 303 aaKnown RBP3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 GMPSP49915 693 aaPredicted RBP3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 NDUFV3P56181 108 aaKnown RBP3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 FKBP3Q00688 224 aaKnown RBP3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 LRRC73Q5JTD7 316 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 FUT10Q6P4F1 479 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 DHRS11Q6UWP2 260 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 SLC22A15Q8IZD6 547 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 CCAR2Q8N163 923 aaKnown RBP3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 P2RX5Q93086 422 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 TOMM40LQ969M1 308 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 FER1L6-AS2Q96M78 137 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 UBAC1Q9BSL1 405 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 CCDC28BQ9BUN5 200 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 ADNPQ9H2P0 1102 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 PRR34Q9NV39 138 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 FBXL4Q9UKA2 621 aa3.58□□□□□ -1.84
RNU4-28P-201ENST00000364739 IGKV6D-41A0A0C4DH26 115 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 E5RGE8 158 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 FIBPO43427 364 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 BCL2L11O43521 198 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 MELTFP08582 738 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 GP9P14770 177 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 EPORP19235 508 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 BDNFP23560 247 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 EDNRAP25101 427 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 NDST2P52849 883 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 CLDN17P56750 224 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 SULT2A1Q06520 285 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 ZNF273Q14593 569 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 HYAL4Q2M3T9 481 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 ZNF542PQ5EBM4 170 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 C11orf53Q8IXP5 236 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 ZC3H3Q8IXZ2 948 aaKnown RBP3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 CCDC191Q8NCU4 936 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 SLC25A23Q9BV35 468 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 RABEP2Q9H5N1 569 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 NSG2Q9Y328 171 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 CCL27Q9Y4X3 112 aa3.57□□□□□ -1.84
RNU4-28P-201ENST00000364739 IGLV3-10A0A075B6K4 115 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 hCG_38984A0A1B0GV85 526 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 MLNRO43193 412 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 ZNF749O43361 778 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 LUC7L3O95232 432 aaKnown RBP3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 MT-ND2P03891 347 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 YES1P07947 543 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 PCP11498 1178 aaKnown RBP3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 EEF2P13639 858 aaKnown RBP3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 C4BPBP20851 252 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 PSMB4P28070 264 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 EEF1DP29692 281 aaKnown RBP3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 MFAP3P55082 362 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 ITPK1Q13572 414 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 KIAA0141Q14154 515 aaPredicted RBP3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 EIPR1Q53HC9 387 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 C1orf141Q5JVX7 400 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 BTNL8Q6UX41 500 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 CHST3Q7LGC8 479 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 CEACAM19Q7Z692 300 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 OR9Q2Q8NGE9 314 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 SPPL2AQ8TCT8 520 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 ZPLD1Q8TCW7 415 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 CHURC1Q8WUH1 139 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 CASP10Q92851 521 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 RMDN2Q96LZ7 410 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 IL12RB2Q99665 862 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 ALKBH7Q9BT30 221 aaPredicted RBP3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 GTSE1Q9NYZ3 720 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 TP53TG3Q9ULZ0 132 aa3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 RUVBL2Q9Y230 463 aaKnown RBP3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 MRPS18CQ9Y3D5 142 aaKnown RBP3.56□□□□□ -1.84
RNU4-28P-201ENST00000364739 ARHGEF33A8MVX0 844 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 FAM86B1E9PN63 330 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 PHOX2AO14813 284 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 SIGLEC5O15389 551 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms