RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 B3GALT2O43825 422 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 BMP2P12643 396 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 TYRP14679 529 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 CCND3P30281 292 aaPredicted RBP13.27□□□□□ -0.28
VCP-201ENST00000358901 STK19P49842 368 aaPredicted RBP13.27□□□□□ -0.28
VCP-201ENST00000358901 CDH11P55287 796 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 CBLBQ13191 982 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 NDUFA9Q16795 377 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 C2orf27AQ580R0 203 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 LY6G5CQ5SRR4 150 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 SLC8B1Q6J4K2 584 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 REEP3Q6NUK4 255 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 LINGO2Q7L985 606 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 GALNT10Q86SR1 603 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 SERINC5Q86VE9 423 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 LRRTM4Q86VH4 590 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 ZBTB8BQ8NAP8 495 aaPredicted RBP13.27□□□□□ -0.28
VCP-201ENST00000358901 FNDC8Q8TC99 324 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 WFIKKN2Q8TEU8 576 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 GPER1Q99527 375 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 TSSK6Q9BXA6 273 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 C1QTNF1Q9BXJ1 281 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 CARS2Q9HA77 564 aaKnown RBP13.27□□□□□ -0.28
VCP-201ENST00000358901 TCF7L1Q9HCS4 588 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 NEUROD4Q9HD90 331 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 WDR6Q9NNW5 1121 aaKnown RBP13.27□□□□□ -0.28
VCP-201ENST00000358901 UCKL1Q9NWZ5 548 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 MS4A12Q9NXJ0 267 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 MSRAQ9UJ68 235 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 BOLA2-SMG1P6H3BVE0 249 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 HSD17B2P37059 387 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 MAGEA6P43360 314 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 FAM189BP81408 668 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 KCNC4Q03721 635 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 ATAT1Q5SQI0 421 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 SYCE2Q6PIF2 218 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 NATD1Q8N6N6 113 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 C7orf57Q8NEG2 295 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 FUBP1Q96AE4 644 aaKnown RBP13.27□□□□□ -0.28
VCP-201ENST00000358901 DPH2Q9BQC3 489 aaPredicted RBP13.27□□□□□ -0.28
VCP-201ENST00000358901 MMP27Q9H306 513 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 FAM118AQ9NWS6 357 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 RWDD3Q9Y3V2 267 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 INSL5Q9Y5Q6 135 aa13.27□□□□□ -0.28
VCP-201ENST00000358901 SH3PXD2BA1X283 911 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 GALTP07902 379 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 C8orf89P0DMQ9 161 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 ACSL1P33121 698 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 GJA8P48165 433 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 PGDP52209 483 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 ARF5P84085 180 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 TMEM115Q12893 351 aaPredicted RBP13.27□□□□□ -0.29
VCP-201ENST00000358901 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.29
VCP-201ENST00000358901 FAAH2Q6GMR7 532 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 GOLM1Q8NBJ4 401 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 FAM46DQ8NEK8 389 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 FAM129BQ96TA1 746 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 MTMR10Q9NXD2 777 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 GLOD5A6NK44 160 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 ANXA2P2A6NMY6 339 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 MAGEB3O15480 346 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 NDUFS4O43181 175 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 SOCS5O75159 536 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 CHRNA1P02708 482 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 HLA-DPB1P04440 258 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 ANXA2P07355 339 aaKnown RBP13.27□□□□□ -0.29
VCP-201ENST00000358901 EIPR1Q53HC9 387 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 ZNF613Q6PF04 617 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 DPY19L3Q6ZPD9 716 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 LRRTM3Q86VH5 581 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 C1orf216Q8TAB5 229 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 ZSWIM3Q96MP5 696 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 TUBA1CQ9BQE3 449 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 MND1Q9BWT6 205 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 C20orf27Q9GZN8 174 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 SDR39U1Q9NRG7 319 aaPredicted RBP13.27□□□□□ -0.29
VCP-201ENST00000358901 IGSF5Q9NSI5 407 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 PAK1IP1Q9NWT1 392 aaPredicted RBP13.27□□□□□ -0.29
VCP-201ENST00000358901 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.29
VCP-201ENST00000358901 CNOT11Q9UKZ1 510 aaKnown RBP13.27□□□□□ -0.29
VCP-201ENST00000358901 A0A0J9YVX5 310 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 IFI30P13284 250 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 AHCYP23526 432 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 PON2Q15165 354 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 ENPP6Q6UWR7 440 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 DRAXINQ8NBI3 349 aaPredicted RBP13.26□□□□□ -0.29
VCP-201ENST00000358901 PTERQ96BW5 349 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 REEP4Q9H6H4 257 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 TOPAZ1Q8N9V7 1692 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 K7ERQ8 282 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 ONECUT3O60422 494 aaPredicted RBP13.26□□□□□ -0.29
VCP-201ENST00000358901 GIMD1P0DJR0 217 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 ERVPABLB-1P60509 514 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 PGBD2Q6P3X8 592 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 ZNF675Q8TD23 568 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 CNDP2Q96KP4 475 aaKnown RBP13.26□□□□□ -0.29
VCP-201ENST00000358901 FUNDC2Q9BWH2 189 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 ASPNQ9BXN1 380 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms