RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ABRAXAS2Q15018 415 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 PRTGQ2VWP7 1150 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 KANK2Q63ZY3 851 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 SCIMPQ6UWF3 145 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 CLYBLQ8N0X4 340 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 SELENOMQ8WWX9 145 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 USP7Q93009 1102 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 SCNM1Q9BWG6 230 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 AICDAQ9GZX7 198 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 POLR1BQ9H9Y6 1135 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 DMRT3Q9NQL9 472 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 ENAMQ9NRM1 1142 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 PNPOQ9NVS9 261 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 TSC22D4Q9Y3Q8 395 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 SPTBP11277 2137 aa14.17□□□□□ -0.14
CCNE1-202ENST00000357943 FITM1A5D6W6 292 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 C9orf172C9J069 976 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 ZNF749O43361 778 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 ULK1O75385 1050 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 SCRG1O75711 98 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 TNFSF15O95150 251 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 MED26O95402 600 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 ETHE1O95571 254 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 KRT6AP02538 564 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 KRT6BP04259 564 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 SERPINA6P08185 405 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 HNRNPH1P31943 449 aaKnown RBP14.16□□□□□ -0.14
CCNE1-202ENST00000357943 PIK3CBP42338 1070 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 KRT6CP48668 564 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 PWP1Q13610 501 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 UGT3A2Q3SY77 523 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 DCAF12Q5T6F0 453 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 CYB5D1Q6P9G0 228 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 BPHLQ86WA6 291 aaPredicted RBP14.16□□□□□ -0.14
CCNE1-202ENST00000357943 ARHGEF39Q8N4T4 335 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 DTWD1Q8N5C7 304 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 OR8K5Q8NH50 307 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 NT5CQ8TCD5 201 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 SEC16BQ96JE7 1060 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 C10orf90Q96M02 699 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 TAAR9Q96RI9 348 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 MS4A8Q9BY19 250 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 SLC6A16Q9GZN6 736 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 OR51B5Q9H339 312 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 TUBB1Q9H4B7 451 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 KLHL31Q9H511 634 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 HAO1Q9UJM8 370 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 PTGDR2Q9Y5Y4 395 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 LAMA5O15230 3695 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 ZFHX4Q86UP3 3567 aa14.16□□□□□ -0.14
CCNE1-202ENST00000357943 LRIT2A6NDA9 550 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 C4orf51C9J302 202 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 FOXE1O00358 373 aaPredicted RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 SNUPNO95149 360 aaKnown RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 NTRK1P04629 796 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 ZNF28P17035 718 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 GCGRP47871 477 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 RPL14P50914 215 aaKnown RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 RGS1Q08116 209 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 GRM7Q14831 915 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 TMEM214Q6NUQ4 689 aaKnown RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 TLDC1Q6P9B6 456 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 CEACAM20Q6UY09 585 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 RGS9BPQ6ZS82 235 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 FAM47EQ6ZV65 393 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 TMEM126BQ8IUX1 230 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 SLC38A9Q8NBW4 561 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 ZCCHC10Q8TBK6 192 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 TWIST2Q8WVJ9 160 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 SLC46A1Q96NT5 459 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 F2RL3Q96RI0 385 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 DDA1Q9BW61 102 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 NLNQ9BYT8 704 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 REXO4Q9GZR2 422 aaKnown RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 FOXJ2Q9P0K8 574 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 DHCR7Q9UBM7 475 aaKnown RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 MARCOQ9UEW3 520 aaPredicted RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 ADGRE2Q9UHX3 823 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 MRPS2Q9Y399 296 aaKnown RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 HYKKA2RU49 373 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 TCP11X1B4DZS4 312 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 SAP18O00422 153 aaKnown RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 TXNDC9O14530 226 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 JUNP05412 331 aaKnown RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 KITP10721 976 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 SERPINB1P30740 379 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 PHEXP78562 749 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 DMTNQ08495 405 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 ADPRMQ3LIE5 342 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 MANEAQ5SRI9 462 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 C10orf62Q5T681 223 aaPredicted RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 TTC29Q8NA56 475 aaPredicted RBP14.15□□□□□ -0.14
CCNE1-202ENST00000357943 MS4A6EQ96DS6 147 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 CMTM7Q96FZ5 175 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 C7orf26Q96N11 449 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 ASPSCR1Q9BZE9 553 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 NRSN2Q9GZP1 204 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 CUTCQ9NTM9 273 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms