RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CCNT2O60583 730 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 H2AFYO75367 372 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 KLK3P07288 261 aaPredicted RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 RPS17P08708 135 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 CD63P08962 238 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 C1GALT1C1LP0DN25 315 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PIM1P11309 404 aaPredicted RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 MTHFD2P13995 350 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 LIFP15018 202 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 KRT15P19012 456 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 GNAZP19086 355 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 TAC1P20366 129 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SERPINB1P30740 379 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 AHRP35869 848 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 BCL6P41182 706 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 GLRBP48167 497 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 RGS1Q08116 209 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 E2F2Q14209 437 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SLBPQ14493 270 aaKnown RBP eCLIP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 TBCCQ15814 346 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 MUM1Q2TAK8 710 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 FAM214AQ32MH5 1076 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 C18orf21Q32NC0 220 aaPredicted RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 NKAPLQ5M9Q1 402 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 FRMPD2BQ6IN97 320 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PRMT9Q6P2P2 845 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 LRIG3Q6UXM1 1119 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 ZNF517Q6ZMY9 492 aaPredicted RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 VN1R4Q7Z5H5 301 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 ASPGQ86U10 573 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 VASH2Q86V25 355 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 DTWD1Q8N5C7 304 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PTGR2Q8N8N7 351 aaPredicted RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 NT5CQ8TCD5 201 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SNRNP27Q8WVK2 155 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 MR1Q95460 341 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 NEIL2Q969S2 332 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 CLIP3Q96DZ5 547 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PTCD3Q96EY7 689 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 NAF1Q96HR8 494 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SLC45A3Q96JT2 553 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PRAP1Q96NZ9 151 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 GBP5Q96PP8 586 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 OR2A5Q96R48 311 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 EFCAB11Q9BUY7 163 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 CD244Q9BZW8 370 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 GPN2Q9H9Y4 310 aaPredicted RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 CPSF2Q9P2I0 782 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 KCND3Q9UK17 655 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PADI1Q9ULC6 663 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PLAAQ9Y263 795 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SLC22A14Q9Y267 594 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 STK38LQ9Y2H1 464 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PADI2Q9Y2J8 665 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 FER1L5A0AVI2 2057 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 LOC105369274A0A096LPK9 316 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 LOC102723532A0A0G2JNH3 316 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 TEX51A0A1B0GUA7 166 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 HYKKA2RU49 373 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 A8MT66 165 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 K7ENP7 123 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 MAP2K7O14733 419 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 P2RX6O15547 441 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 UGDHO60701 494 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 KATNA1O75449 491 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 RECKO95980 971 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 NTRK1P04629 796 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 CTSBP07858 339 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SLC35G6P0C7Q6 338 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 FBLP22087 321 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 ATP5F1P24539 256 aaPredicted RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 DLSTP36957 453 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 CASP2P42575 452 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SLCO1A2P46721 670 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 KCNC1P48547 511 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 NAA20P61599 178 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SKP1P63208 163 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 YBX1P67809 324 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 DCDP81605 110 aaKnown RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SLC18A2Q05940 514 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 CDC20Q12834 499 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PWP1Q13610 501 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 NCF4Q15080 339 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 TGIF1Q15583 401 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 CCDC153Q494R4 210 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PAGE2BQ5JRK9 111 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 WASHC2DQ5SRD0 308 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 PRAMEF17Q5VTA0 474 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 GRHL2Q6ISB3 625 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 NIPAL1Q6NVV3 410 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 FBXO42Q6P3S6 717 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 INO80CQ6PI98 192 aaPredicted RBP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SHISA2Q6UWI4 295 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SYVN1Q86TM6 617 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SLC22A9Q8IVM8 553 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.78□□□□□ -1.8
CNOT4-202ENST00000356162 OR4N4Q8N0Y3 316 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 ARHGEF39Q8N4T4 335 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 RDH11Q8TC12 318 aa3.78□□□□□ -1.8
CNOT4-202ENST00000356162 UBE2E3Q969T4 207 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 279.5 ms