RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ZNF419Q96HQ0 510 aaPredicted RBP15.2■□□□□ 0.02
RTN3-205ENST00000356000 BCO2Q9BYV7 579 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 SLC29A3Q9BZD2 475 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 ELOVL4Q9GZR5 314 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 POLR3FQ9H1D9 316 aaPredicted RBP15.2■□□□□ 0.02
RTN3-205ENST00000356000 ALG9Q9H6U8 611 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 IKZF3Q9UKT9 509 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 ACAD8Q9UKU7 415 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 RPH3AQ9Y2J0 694 aaPredicted RBP15.2■□□□□ 0.02
RTN3-205ENST00000356000 TRABD2BA6NFA1 517 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 M0R233 179 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 AKAP8O43823 692 aaKnown RBP15.2■□□□□ 0.02
RTN3-205ENST00000356000 ITGB7P26010 798 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 APEX1P27695 318 aaKnown RBP15.2■□□□□ 0.02
RTN3-205ENST00000356000 ARL4AP40617 200 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 NUDT6P53370 316 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 AIF1P55008 147 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 CAMK2GQ13555 558 aaPredicted RBP15.2■□□□□ 0.02
RTN3-205ENST00000356000 TNFAIP1Q13829 316 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 SNAPC1Q16533 368 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 DENND1CQ8IV53 801 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 Q8N402 240 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 BVESQ8NE79 360 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 SLC13A3Q8WWT9 602 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 SLC25A46Q96AG3 418 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 KCNJ15Q99712 375 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 HTATIP2Q9BUP3 242 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 APOL5Q9BWW9 433 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 CDCA4Q9BXL8 241 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 HCN3Q9P1Z3 774 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 DERAQ9Y315 318 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 ASB4Q9Y574 426 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 PRAMEF33A0A0G2JMD5 474 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 ZBTB24O43167 697 aaPredicted RBP15.19■□□□□ 0.02
RTN3-205ENST00000356000 SGCEO43556 437 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 PRAMEF10O60809 474 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 FKTNO75072 461 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 STOMP27105 288 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 JAK3P52333 1124 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 AGFG1P52594 562 aaKnown RBP15.19■□□□□ 0.02
RTN3-205ENST00000356000 DCDC1P59894 354 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 CAMK2DQ13557 499 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 MPEG1Q2M385 716 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 DDI2Q5TDH0 399 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 FRMPD2BQ6IN97 320 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 FAHD1Q6P587 224 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 PKN3Q6P5Z2 889 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 ISCA2Q86U28 154 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 FAM126BQ8IXS8 530 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 PYROXD2Q8N2H3 581 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 ULK4Q96C45 1275 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 TMEM176AQ96HP8 235 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 CXorf58Q96LI9 332 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 PPP1R3EQ9H7J1 279 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 PRDM9Q9NQV7 894 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 STUB1Q9UNE7 303 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 GLYATL1P3A0A0U1RQE8 302 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 C7orf66A4D0T2 115 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 MYO1GB0I1T2 1018 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 DGAT1O75907 488 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 PRAMEF1O95521 474 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 IFNA4P05014 189 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 ICAM3P32942 547 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 GGT2P36268 569 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 TNFSF9P41273 254 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 XKR7Q5GH72 579 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 FAM171A1Q5VUB5 890 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 SYPL2Q5VXT5 272 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 ALG1LQ6GMV1 187 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 TMEM132CQ8N3T6 1108 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 ZNF565Q8N9K5 539 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 C10orf90Q96M02 699 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 SOSTQ9BQB4 213 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 ZNF251Q9BRH9 671 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 THUMPD3Q9BV44 507 aaKnown RBP15.19■□□□□ 0.02
RTN3-205ENST00000356000 PRR14Q9BWN1 585 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 GABARAPL3Q9BY60 117 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 HHATLQ9HCP6 504 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 TAS2R16Q9NYV7 291 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 RCOR3Q9P2K3 495 aaPredicted RBP15.19■□□□□ 0.02
RTN3-205ENST00000356000 MRPL11Q9Y3B7 192 aaKnown RBP15.19■□□□□ 0.02
RTN3-205ENST00000356000 MIA3Q5JRA6 1907 aa15.19■□□□□ 0.02
RTN3-205ENST00000356000 RRN3P2A6NIE6 340 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 SIX3O95343 332 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 ATP12AP54707 1039 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 RELQ04864 619 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 DOC2BQ14184 412 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 PFKFB4Q16877 469 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 ZNF628Q5EBL2 1059 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 GCNT7Q6ZNI0 430 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 NETO1Q8TDF5 533 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 NSUN5Q96P11 429 aaKnown RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 TMEM43Q9BTV4 400 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 C11orf84Q9BUA3 381 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 RGS18Q9NS28 235 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 PLEKHB1Q9UF11 243 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 GPN3Q9UHW5 284 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 ERVK-19Q9WJR5 959 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 UBIAD1Q9Y5Z9 338 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 POLR2AP24928 1970 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms