RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SORT1Q99523 831 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 DPH7Q9BTV6 452 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 NDC1Q9BTX1 674 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 SEMA4CQ9C0C4 833 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 NOL11Q9H8H0 719 aaKnown RBP13.18□□□□□ -0.3
TPM4-202ENST00000344824 ZBTB26Q9HCK0 441 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 SLC6A20Q9NP91 592 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 MID1IP1Q9NPA3 183 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 CCDC177Q9NQR7 707 aaPredicted RBP13.18□□□□□ -0.3
TPM4-202ENST00000344824 DNAJC11Q9NVH1 559 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 SNX7Q9UNH6 387 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 SRPK3Q9UPE1 567 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 TLN1Q9Y490 2541 aaKnown RBP13.18□□□□□ -0.3
TPM4-202ENST00000344824 SPTA1P02549 2419 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 GMNCA6NCL1 334 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 E7ENX8 843 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 SHOX2O60902 331 aaPredicted RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 CREG1O75629 220 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 CCNDBP1O95273 360 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 FKBP9O95302 570 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 EIF2S1P05198 315 aaKnown RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 ERGP11308 486 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 EPB42P16452 691 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 AGXTP21549 392 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 RORAP35398 523 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 HSD17B2P37059 387 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 CCNG1P51959 295 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 OCRLQ01968 901 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 TAP2Q03519 686 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 ARHGAP19Q14CB8 494 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 ZC3H12BQ5HYM0 836 aaKnown RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 FAM69BQ5VUD6 431 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 MLIPQ5VWP3 458 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 CAPN13Q6MZZ7 669 aaPredicted RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 TLDC1Q6P9B6 456 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 TTLL10Q6ZVT0 673 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 CUZD1Q86UP6 607 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 CRLF3Q8IUI8 442 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 MCATQ8IVS2 390 aaKnown RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 METTL27Q8N6F8 245 aaPredicted RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 ZNF781Q8N8C0 355 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 OR2A1Q8NGT9 310 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 OR56A3Q8NH54 315 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 HMGCLL1Q8TB92 370 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 CATSPER2Q96P56 530 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 ZNF317Q96PQ6 595 aaPredicted RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 CDK15Q96Q40 435 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 C1QTNF3Q9BXJ4 246 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 IPPKQ9H8X2 491 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 EML4Q9HC35 981 aaKnown RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 PNPOQ9NVS9 261 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 GPN3Q9UHW5 284 aaPredicted RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 FARSAQ9Y285 508 aaKnown RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 AP1M2Q9Y6Q5 423 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 TNRC6AQ8NDV7 1962 aaKnown RBP13.17□□□□□ -0.3
TPM4-202ENST00000344824 NUP210LQ5VU65 1888 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 MED13Q9UHV7 2174 aa13.17□□□□□ -0.3
TPM4-202ENST00000344824 A0A1B0GTL3 188 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 UBFD1O14562 309 aaKnown RBP13.16□□□□□ -0.3
TPM4-202ENST00000344824 OR7A17O14581 309 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 TERTO14746 1132 aaKnown RBP13.16□□□□□ -0.3
TPM4-202ENST00000344824 PRICKLE3O43900 615 aaPredicted RBP13.16□□□□□ -0.3
TPM4-202ENST00000344824 CTSVO60911 334 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 CRCPO75575 148 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 ALAS2P22557 587 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 PTPN4P29074 926 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 SERPINB5P36952 375 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 POLE2P56282 527 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 CDC16Q13042 620 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 LCP2Q13094 533 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 NAA25Q14CX7 972 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 TUBB8Q3ZCM7 444 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 SH2D4BQ5SQS7 431 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 PRAMEF13Q5VWM6 474 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 ICE2Q659A1 982 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 FRMPD2BQ6IN97 320 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 FAM198BQ6UWH4 519 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 CPLX4Q7Z7G2 160 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 SYVN1Q86TM6 617 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 MYLK4Q86YV6 388 aaPredicted RBP13.16□□□□□ -0.3
TPM4-202ENST00000344824 LRRC56Q8IYG6 542 aaPredicted RBP13.16□□□□□ -0.3
TPM4-202ENST00000344824 OR52B6Q8NGF0 335 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 LRFN5Q96NI6 719 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 OR4K3Q96R72 315 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 CHRNA10Q9GZZ6 450 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 ILKAPQ9H0C8 392 aaPredicted RBP13.16□□□□□ -0.3
TPM4-202ENST00000344824 TNFRSF12AQ9NP84 129 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 CUEDC1Q9NWM3 386 aaPredicted RBP13.16□□□□□ -0.3
TPM4-202ENST00000344824 ZDHHC2Q9UIJ5 367 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 POLHQ9Y253 713 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 MAN2B2Q9Y2E5 1009 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 DYRK1BQ9Y463 629 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 SCN3AQ9NY46 2000 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 BOD1L1Q8NFC6 3051 aa13.16□□□□□ -0.3
TPM4-202ENST00000344824 TMEM233B4DJY2 109 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 CLGNO14967 610 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 OR4F21O95013 312 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 MLYCDO95822 493 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 FURINP09958 794 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms