RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 XCR1P46094 333 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 GLRBP48167 497 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 KCNC1P48547 511 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 CDKL1Q00532 357 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 REEP5Q00765 189 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 RHAGQ02094 409 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 GUCY2DQ02846 1103 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 C4orf17Q53FE4 359 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 KBTBD2Q8IY47 623 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 NKAPQ8N5F7 415 aaKnown RBP16.09■□□□□ 0.17
BRCC3-202ENST00000340647 SIRT6Q8N6T7 355 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 DNAJB14Q8TBM8 379 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 NT5CQ8TCD5 201 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 FBXO25Q8TCJ0 367 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 CREB3L4Q8TEY5 395 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 PYROXD1Q8WU10 500 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 RHBDF1Q96CC6 855 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 NPAS2Q99743 824 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 ILKAPQ9H0C8 392 aaPredicted RBP16.09■□□□□ 0.17
BRCC3-202ENST00000340647 KLHL31Q9H511 634 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 PTGFRNQ9P2B2 879 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 EIF3HO15372 352 aaKnown RBP eCLIP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 PHGDHO43175 533 aaKnown RBP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 GALR3O60755 368 aaPredicted RBP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 FAM155BO75949 473 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 C8orf89P0DMQ9 161 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 VARSP26640 1264 aaKnown RBP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 TSFMP43897 325 aaKnown RBP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 OLR1P78380 273 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 PWP1Q13610 501 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 OR4D1Q15615 310 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 ZKSCAN8Q15776 578 aaPredicted RBP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 UBAP2Q5T6F2 1119 aaKnown RBP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 NXPE4Q6UWF7 544 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 ANKRD37Q7Z713 158 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 BBOF1Q8ND07 529 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 UTP15Q8TED0 518 aaKnown RBP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 ATL1Q8WXF7 558 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 TM9SF4Q92544 642 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 GPR22Q99680 433 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 RBBP8Q99708 897 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 TMEM79Q9BSE2 394 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 TRIM54Q9BYV2 358 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 SLC6A16Q9GZN6 736 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 DERL2Q9GZP9 239 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 POPDC3Q9HBV1 291 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 LRRC4CQ9HCJ2 640 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 GPAMQ9HCL2 828 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 ZFP69BQ9UJL9 534 aa16.08■□□□□ 0.16
BRCC3-202ENST00000340647 COPG1Q9Y678 874 aaKnown RBP16.08■□□□□ 0.16
BRCC3-202ENST00000340647 CROCCQ5TZA2 2017 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 NDUFS4O43181 175 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 SEC24DO94855 1032 aaPredicted RBP16.07■□□□□ 0.16
BRCC3-202ENST00000340647 CASQ1P31415 396 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 DLG1Q12959 904 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 ZNF169Q14929 603 aaPredicted RBP16.07■□□□□ 0.16
BRCC3-202ENST00000340647 FBXO48Q5FWF7 155 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 SLCO4C1Q6ZQN7 724 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 C3orf62Q6ZUJ4 267 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 CPEB2Q7Z5Q1 589 aaKnown RBP16.07■□□□□ 0.16
BRCC3-202ENST00000340647 PLPP5Q8NEB5 264 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 TSLPQ969D9 159 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 PEX11GQ96HA9 241 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 UBXN10Q96LJ8 280 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 TAAR6Q96RI8 345 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 RBCK1Q9BYM8 510 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 FAM129AQ9BZQ8 928 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 PELI2Q9HAT8 420 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 ANKHQ9HCJ1 492 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 RIC8BQ9NVN3 520 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 ERRFI1Q9UJM3 462 aaPredicted RBP16.07■□□□□ 0.16
BRCC3-202ENST00000340647 ASB1Q9Y576 335 aa16.07■□□□□ 0.16
BRCC3-202ENST00000340647 DIDO1Q9BTC0 2240 aaKnown RBP16.07■□□□□ 0.16
BRCC3-202ENST00000340647 MYO9AB2RTY4 2548 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 DOPEY1Q5JWR5 2465 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 WIPF3A6NGB9 483 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 PCDH17O14917 1159 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 MAN1A2O60476 641 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 WISP2O76076 250 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 F10P00742 488 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 SLC35G6P0C7Q6 338 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 ZNF888P0CJ79 500 aaPredicted RBP16.06■□□□□ 0.16
BRCC3-202ENST00000340647 CD1DP15813 335 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 ALOX12P18054 663 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 EPORP19235 508 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 CXCR2P25025 360 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 AHRP35869 848 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 TNFSF10P50591 281 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 PLTPP55058 493 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 POU4F1Q01851 419 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 CSHL1Q14406 222 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 TGFBIQ15582 683 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 MINDY4Q4G0A6 757 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 DEFB134Q4QY38 66 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 FHL5Q5TD97 284 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 ZNF324BQ6AW86 544 aaPredicted RBP16.06■□□□□ 0.16
BRCC3-202ENST00000340647 ADNP2Q6IQ32 1131 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 H3F3CQ6NXT2 135 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms