RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 MAGEB17A8MXT2 336 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 C9orf172C9J069 976 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 MANBAO00462 879 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 ZNF749O43361 778 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 SERPINA6P08185 405 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 SERPINB1P30740 379 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 OCRLQ01968 901 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 GUCY1A3Q02108 690 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 HYAL2Q12891 473 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 GRM7Q14831 915 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 C10orf62Q5T681 223 aaPredicted RBP21.13■□□□□ 0.97
SDC3-202ENST00000339394 NT5CQ8TCD5 201 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 SELENOMQ8WWX9 145 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 SLC46A1Q96NT5 459 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 DDA1Q9BW61 102 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 NLNQ9BYT8 704 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 FIS1Q9Y3D6 152 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 PCDHGA3Q9Y5H0 932 aa21.13■□□□□ 0.97
SDC3-202ENST00000339394 HYKKA2RU49 373 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 LRIT2A6NDA9 550 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 FOXE1O00358 373 aaPredicted RBP21.12■□□□□ 0.97
SDC3-202ENST00000339394 SCRG1O75711 98 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 TGFB1P01137 390 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 PDYNP01213 254 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 RGS1Q08116 209 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 ABRAXAS2Q15018 415 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 TMEM164Q5U3C3 297 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 KANK2Q63ZY3 851 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 TMEM126BQ8IUX1 230 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 ARHGEF39Q8N4T4 335 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 RNF31Q96EP0 1072 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 TEFMQ96QE5 360 aaKnown RBP21.12■□□□□ 0.97
SDC3-202ENST00000339394 HBEGFQ99075 208 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 ZPBPQ9BS86 351 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 SLC6A16Q9GZN6 736 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 DMRT3Q9NQL9 472 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 HAO1Q9UJM8 370 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.12■□□□□ 0.97
SDC3-202ENST00000339394 DNAJC15Q9Y5T4 150 aa21.12■□□□□ 0.97
SDC3-202ENST00000339394 ADRB1P08588 477 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 HTR6P50406 440 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 RPL14P50914 215 aaKnown RBP21.11■□□□□ 0.97
SDC3-202ENST00000339394 RPS13P62277 151 aaKnown RBP21.11■□□□□ 0.97
SDC3-202ENST00000339394 UGT3A2Q3SY77 523 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 TMEM214Q6NUQ4 689 aaKnown RBP21.11■□□□□ 0.97
SDC3-202ENST00000339394 TTC29Q8NA56 475 aaPredicted RBP21.11■□□□□ 0.97
SDC3-202ENST00000339394 MS4A8Q9BY19 250 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 AICDAQ9GZX7 198 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 KLHL31Q9H511 634 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 SLCO1B3Q9NPD5 702 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 PCDHB3Q9Y5E6 796 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 ADAMTS20P59510 1910 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 PTPRBP23467 1997 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 FREM2Q5SZK8 3169 aa21.11■□□□□ 0.97
SDC3-202ENST00000339394 SH3BGRLO75368 114 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 NTRK1P04629 796 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 HNRNPH1P31943 449 aaKnown RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 MDH1P40925 334 aaKnown RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 GCGRP47871 477 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 SNRPNP63162 240 aaKnown RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 PHEXP78562 749 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 KIF26BQ2KJY2 2108 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 FAM214AQ32MH5 1076 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 SCIMPQ6UWF3 145 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 RGS9BPQ6ZS82 235 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 SLC38A9Q8NBW4 561 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 CMTM7Q96FZ5 175 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 C10orf90Q96M02 699 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 NDC1Q9BTX1 674 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 REXO4Q9GZR2 422 aaKnown RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 OR51B5Q9H339 312 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 ACTR5Q9H9F9 607 aaPredicted RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 CUTCQ9NTM9 273 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 PSD3Q9NYI0 1048 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 NEUROG3Q9Y4Z2 214 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 TRABD2BA6NFA1 517 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 NVLO15381 856 aaKnown RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 MED26O95402 600 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 ETHE1O95571 254 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 ZNF28P17035 718 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 PTX3P26022 381 aaPredicted RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 RBMS1P29558 406 aaKnown RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 EMP3P54852 163 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 STXBP1P61764 594 aaKnown RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 ZNF33BQ06732 778 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 RTP5Q14D33 572 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 ADPRMQ3LIE5 342 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 GARNL3Q5VVW2 1013 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 F2RL3Q96RI0 385 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 ULBP3Q9BZM4 244 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 B3GNT4Q9C0J1 378 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 PNPOQ9NVS9 261 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 FOXJ2Q9P0K8 574 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 DHCR7Q9UBM7 475 aaKnown RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 PPT2Q9UMR5 302 aa21.1■□□□□ 0.97
SDC3-202ENST00000339394 MRPS2Q9Y399 296 aaKnown RBP21.1■□□□□ 0.97
SDC3-202ENST00000339394 KIAA0754O94854 1291 aa21.09■□□□□ 0.97
SDC3-202ENST00000339394 CHEK2O96017 543 aa21.09■□□□□ 0.97
SDC3-202ENST00000339394 ARSFP54793 590 aa21.09■□□□□ 0.97
SDC3-202ENST00000339394 MUM1Q2TAK8 710 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms