RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 IGHV5-51A0A0C4DH38 117 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 A0A1W2PQM1 296 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 URADA6NGE7 173 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 EBAG9O00559 213 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 FCHO1O14526 889 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 KIF1CO43896 1103 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 SH3BP5O60239 455 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 SRPX2O60687 465 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 MYO1DO94832 1006 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 TGFB1P01137 390 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 MSL3P1P0C860 447 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 ARL4DP49703 201 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 ATP4BP51164 291 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 RPL38P63173 70 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 CCL7P80098 99 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 ADPRMQ3LIE5 342 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 DEPDC1Q5TB30 811 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 GALNT18Q6P9A2 607 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 TRPM8Q7Z2W7 1104 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 CLNKQ7Z7G1 428 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 CAMKVQ8NCB2 501 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 NT5CQ8TCD5 201 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 SLC13A3Q8WWT9 602 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 GFM1Q96RP9 751 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 NUDT22Q9BRQ3 303 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 NMUR2Q9GZQ4 415 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 KLHL25Q9H0H3 589 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 MYLK2Q9H1R3 596 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 OR51B5Q9H339 312 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 SAR1AQ9NR31 198 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 SIRT5Q9NXA8 310 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 EIF3LQ9Y262 564 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 RUVBL1Q9Y265 456 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 A0A0J9YVX5 310 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 LRIT2A6NDA9 550 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 D6RAR5 112 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 ZSCAN9O15535 394 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 HOXB3P14651 431 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 TSFMP43897 325 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 MRPL19P49406 292 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 RAP1GDS1P52306 607 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 TBL3Q12788 808 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 SQLEQ14534 574 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 KIAA0040Q15053 153 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 RFTN2Q52LD8 501 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 TMTC4Q5T4D3 741 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 FAM91A1Q658Y4 838 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 TMEM198Q66K66 360 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 PAGE2Q7Z2X7 111 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 VN1R4Q7Z5H5 301 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 RNF175Q8N4F7 328 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 CPSF7Q8N684 471 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 CHTF18Q8WVB6 975 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 KLHL6Q8WZ60 621 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 RGMAQ96B86 450 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 TM4SF19Q96DZ7 209 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 C11orf24Q96F05 449 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 SLC41A2Q96JW4 573 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 FCRL1Q96LA6 429 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 BRINP2Q9C0B6 783 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 SLC6A16Q9GZN6 736 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 REXO4Q9GZR2 422 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 ZNF768Q9H5H4 540 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 AIG1Q9NVV5 245 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 TMEM45AQ9NWC5 275 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 KLHL3Q9UH77 587 aa13.88□□□□□ -0.19
NIPAL3-202ENST00000339255 SPTBP11277 2137 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 NTN3O00634 580 aaPredicted RBP13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 ETHE1O95571 254 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 SERPIND1P05546 499 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 ALDOCP09972 364 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 THRAP10827 490 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 NELFEP18615 380 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 ACADVLP49748 655 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 LIMK1P53667 647 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 TRA2AQ13595 282 aaKnown RBP eCLIP13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 SPIDRQ14159 915 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 TRIM40Q6P9F5 258 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 MCATQ8IVS2 390 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 METTL4Q8N3J2 472 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 DNAJC22Q8N4W6 341 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 C1orf52Q8N6N3 182 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 OR2L5Q8NG80 312 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 GAL3ST3Q96A11 431 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 ERP27Q96DN0 273 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 CATSPER2Q96P56 530 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 QRFPRQ96P65 431 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 KCNC2Q96PR1 638 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 MRPL1Q9BYD6 325 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 ZNF385DQ9H6B1 395 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 FAM60AQ9NP50 221 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 SDR39U1Q9NRG7 319 aaPredicted RBP13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 GIMAP2Q9UG22 337 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 ADAM29Q9UKF5 820 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 PLCL2Q9UPR0 1127 aa13.87□□□□□ -0.19
NIPAL3-202ENST00000339255 H0YGG7 62 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 TBX6O95947 436 aaPredicted RBP13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 PRPS2P11908 318 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 HNRNPH1P31943 449 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms