RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TMEM173Q86WV6 379 aaPredicted RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 TCEANCQ8N8B7 351 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 GPR26Q8NDV2 337 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 XAGE5Q8WWM1 108 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 UROC1Q96N76 676 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 FOPNLQ96NB1 174 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 ABCB8Q9NUT2 735 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 TRAV19A0A0A6YYK7 116 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 STC2O76061 302 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 GRK5P34947 590 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 CNR2P34972 360 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 HMGCLP35914 325 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 RFX3P48380 749 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 RPS13P62277 151 aaKnown RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 KRR1Q13601 381 aaKnown RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 PROX2Q3B8N5 592 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 LRIT3Q3SXY7 679 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 C5orf22Q49AR2 442 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 OLIG3Q7RTU3 272 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 TMCO2Q7Z6W1 182 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 IPCEF1Q8WWN9 437 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 SLC35B4Q969S0 331 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 CIDECQ96AQ7 238 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 FUBP3Q96I24 572 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF300Q96RE9 604 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 P2RY13Q9BPV8 354 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 SLC13A4Q9UKG4 626 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 PRR23AA6NEV1 266 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 FAM47E-STBD1D6RA91 191 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 AREL1O15033 823 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 DUSP11O75319 330 aaKnown RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 CCR7P32248 378 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 PIK3CBP42338 1070 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 PPM1FP49593 454 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 SCARB2Q14108 478 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 SPATS1Q496A3 300 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 IFI44LQ53G44 452 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 ZC3H12BQ5HYM0 836 aaKnown RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 NXNL2Q5VZ03 156 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 ERAP2Q6P179 960 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 PAMR1Q6UXH9 720 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF852Q6ZMS4 543 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 EID2BQ96D98 161 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 MTG2Q9H4K7 406 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 SP140LQ9H930 580 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 IFT52Q9Y366 437 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 LYVE1Q9Y5Y7 322 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 SPIN1Q9Y657 262 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 DOCK1Q14185 1865 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 WASH4PA8MWX3 477 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 E7EQ34 232 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 TLX2O43763 284 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 GBX1Q14549 363 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 IQCCQ4KMZ1 466 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 RPS26P11Q5JNZ5 115 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF544Q6NX49 715 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 NXPE1Q8N323 547 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 CADM2Q8N3J6 435 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 LILRA3Q8N6C8 439 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 PCNPQ8WW12 178 aaKnown RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 PPCDCQ96CD2 204 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 SLC22A12Q96S37 553 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 LINC00597Q9H2U6 94 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 CRNNQ9UBG3 495 aaPredicted RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 LSM7Q9UK45 103 aaKnown RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 ABT1Q9ULW3 272 aaKnown RBP13.64□□□□□ -0.23
PCDH8-201ENST00000338862 SSR3Q9UNL2 185 aa13.64□□□□□ -0.23
PCDH8-201ENST00000338862 TRBC2A0A5B9 178 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 CLCA1A8K7I4 914 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 ANKRD28O15084 1053 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 ADAMDEC1O15204 470 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 CCNB2O95067 398 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 KCNK5O95279 499 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 SDHBP21912 280 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 NSG1P42857 185 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 SLC11A1P49279 550 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 TARDBPQ13148 414 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 TIMM50Q3ZCQ8 353 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 DDI2Q5TDH0 399 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 C22orf42Q6IC83 251 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 PLET1Q6UQ28 207 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 Q6ZVL8 140 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 USP50Q70EL3 339 aaPredicted RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 SERINC5Q86VE9 423 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 CMTM8Q8IZV2 173 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 ISG20Q96AZ6 181 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 COL21A1Q96P44 957 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 FYTTD1Q96QD9 318 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 TRIB3Q96RU7 358 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF639Q9UID6 485 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 CFAP20Q9Y6A4 193 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 PIPSLA2A3N6 862 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 NPIPB15A6NHN6 443 aaPredicted RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 KLK1P06870 262 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 CCNYL3P0C7X3 344 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 CRTC2Q53ET0 693 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms