RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 OR8J3Q8NGG0 315 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 ZDHHC1Q8WTX9 485 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 ANKRD27Q96NW4 1050 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 OR2A14Q96R47 310 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 RMND5AQ9H871 391 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 S100A14Q9HCY8 104 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 MYNNQ9NPC7 610 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 VAPAQ9P0L0 249 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 EXO1Q9UQ84 846 aaKnown RBP14.8□□□□□ -0.04
LIMS1-202ENST00000338045 L3MBTL1Q9Y468 752 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 CEP192Q8TEP8 1941 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 HAT1O14929 419 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 VILLO15195 856 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 PDGFBP01127 241 aaPredicted RBP14.79□□□□□ -0.04
LIMS1-202ENST00000338045 COX7A2P14406 83 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 PTPN6P29350 595 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 GRIA3P42263 894 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 ERFP50548 548 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 ZIC1Q15915 447 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 CCDC6Q16204 474 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 HKDC1Q2TB90 917 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 PGS1Q32NB8 556 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 PAQR7Q86WK9 346 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 MSRB3Q8IXL7 192 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 SLC26A7Q8TE54 656 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 COQ8BQ96D53 544 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 ITCHQ96J02 903 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 PPM1MQ96MI6 270 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 F2RL3Q96RI0 385 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 REXO4Q9GZR2 422 aaKnown RBP14.79□□□□□ -0.04
LIMS1-202ENST00000338045 PAIP1Q9H074 479 aaKnown RBP14.79□□□□□ -0.04
LIMS1-202ENST00000338045 PCDHAC1Q9H158 963 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 FAM120CQ9NX05 1096 aaKnown RBP14.79□□□□□ -0.04
LIMS1-202ENST00000338045 SLC25A37Q9NYZ2 338 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 ATP6V1HQ9UI12 483 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 BTBD3Q9Y2F9 522 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 PCDHGA2Q9Y5H1 932 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 ENTPD2Q9Y5L3 495 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 AP1M2Q9Y6Q5 423 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 SNRNP200O75643 2136 aaKnown RBP14.79□□□□□ -0.04
LIMS1-202ENST00000338045 KNL1Q8NG31 2342 aa14.79□□□□□ -0.04
LIMS1-202ENST00000338045 A0A096LPI6 279 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 GABRR3A8MPY1 467 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 TNFSF14O43557 240 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 DFNA5O60443 496 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 KLK1P06870 262 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 TDGF1P13385 188 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 TPP2P29144 1249 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-202ENST00000338045 BSGP35613 385 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 HPCAL1P37235 193 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 AP2B1P63010 937 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 BNIP2Q12982 314 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 FXNQ16595 210 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 ADPRMQ3LIE5 342 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 C1QTNF12Q5T7M4 302 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 OR4F3Q6IEY1 312 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 FAM71E1Q6IPT2 247 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 TMEM26Q6ZUK4 368 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 TBC1D19Q8N5T2 526 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 BHLHE22Q8NFJ8 381 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-202ENST00000338045 C16orf78Q8WTQ4 265 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 TRIM8Q9BZR9 551 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 ALG2Q9H553 416 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 LHX9Q9NQ69 397 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 PRMT8Q9NR22 394 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-202ENST00000338045 ACTR10Q9NZ32 417 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 GMPR2Q9P2T1 348 aaKnown RBP14.78□□□□□ -0.04
LIMS1-202ENST00000338045 PCDHGA4Q9Y5G9 962 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 KLK4Q9Y5K2 254 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 DNAH14Q0VDD8 3507 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 OR2A25A4D2G3 310 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 OR6C74A6NCV1 312 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 LRIT2A6NDA9 550 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 DNAJA2O60884 412 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 FKBP9O95302 570 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 GBAP04062 536 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 PIM1P11309 404 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-202ENST00000338045 HOXB3P14651 431 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-202ENST00000338045 UGT2B7P16662 529 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 GSK3BP49841 420 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 PLIN5Q00G26 463 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 HHEXQ03014 270 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 LIPEQ05469 1076 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 PDE7AQ13946 482 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 TMEM35AQ53FP2 167 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 WDR45BQ5MNZ6 344 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 IKBIPQ70UQ0 350 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 UBE3DQ7Z6J8 389 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 GKN2Q86XP6 184 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 PTRH1Q86Y79 214 aaKnown RBP14.78□□□□□ -0.04
LIMS1-202ENST00000338045 SDR16C5Q8N3Y7 309 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 MFSD9Q8NBP5 474 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 HIPK4Q8NE63 616 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 TRPV3Q8NET8 790 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 CDC26Q8NHZ8 85 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 PRPF18Q99633 342 aaKnown RBP14.78□□□□□ -0.04
LIMS1-202ENST00000338045 CENPKQ9BS16 269 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 AICDAQ9GZX7 198 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 REEP4Q9H6H4 257 aa14.78□□□□□ -0.04
LIMS1-202ENST00000338045 SPASTQ9UBP0 616 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms