RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 PDE7BQ9NP56 450 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 PFDN4Q9NQP4 134 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 RIC8BQ9NVN3 520 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 DLL3Q9NYJ7 618 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 NDUFS4O43181 175 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 RFPL3O75679 317 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 RSL1D1O76021 490 aaKnown RBP20.53■□□□□ 0.88
TPM1-204ENST00000334895 SERPIND1P05546 499 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 NELFEP18615 380 aaKnown RBP20.53■□□□□ 0.88
TPM1-204ENST00000334895 HNRNPH1P31943 449 aaKnown RBP20.53■□□□□ 0.88
TPM1-204ENST00000334895 SNRPNP63162 240 aaKnown RBP20.53■□□□□ 0.88
TPM1-204ENST00000334895 PHEXP78562 749 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 TBL3Q12788 808 aaKnown RBP20.53■□□□□ 0.88
TPM1-204ENST00000334895 ILKQ13418 452 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 TRIP6Q15654 476 aaKnown RBP20.53■□□□□ 0.88
TPM1-204ENST00000334895 GALNTL6Q49A17 601 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 C6orf136Q5SQH8 315 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 TMEM198Q66K66 360 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 NXNQ6DKJ4 435 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 ACAD11Q709F0 780 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 DGLUCYQ7Z3D6 616 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 GLRX5Q86SX6 157 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 MCATQ8IVS2 390 aaKnown RBP20.53■□□□□ 0.88
TPM1-204ENST00000334895 TRPV3Q8NET8 790 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 SLC13A3Q8WWT9 602 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 APIPQ96GX9 242 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 VPS29Q9UBQ0 182 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 ARL2BPQ9Y2Y0 163 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 DCDC2BA2VCK2 349 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 LRIT2A6NDA9 550 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 C4orf51C9J302 202 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 E9PBE3 544 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 SAP18O00422 153 aaKnown RBP20.52■□□□□ 0.88
TPM1-204ENST00000334895 KLHL41O60662 606 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 VPS4BO75351 444 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 SDHBP21912 280 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 ZFP36L1Q07352 338 aaKnown RBP20.52■□□□□ 0.88
TPM1-204ENST00000334895 KIAA0040Q15053 153 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 TERF2Q15554 542 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 AP5B1Q2VPB7 878 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 ADPRMQ3LIE5 342 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 RFTN2Q52LD8 501 aaPredicted RBP20.52■□□□□ 0.88
TPM1-204ENST00000334895 CCDC157Q569K6 752 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 ZC3H12BQ5HYM0 836 aaKnown RBP20.52■□□□□ 0.88
TPM1-204ENST00000334895 KHDRBS2Q5VWX1 349 aaKnown RBP20.52■□□□□ 0.88
TPM1-204ENST00000334895 CEP70Q8NHQ1 597 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 NT5CQ8TCD5 201 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 CMTM7Q96FZ5 175 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 RILPQ96NA2 401 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 F2RL3Q96RI0 385 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 SERPINI1Q99574 410 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 MRPL1Q9BYD6 325 aaKnown RBP20.52■□□□□ 0.88
TPM1-204ENST00000334895 SLC6A16Q9GZN6 736 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 KLHL31Q9H511 634 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 LRTM1Q9HBL6 345 aa20.52■□□□□ 0.88
TPM1-204ENST00000334895 SERPINA6P08185 405 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 ALDOCP09972 364 aaKnown RBP20.51■□□□□ 0.87
TPM1-204ENST00000334895 PTX3P26022 381 aaPredicted RBP20.51■□□□□ 0.87
TPM1-204ENST00000334895 VSX2P58304 361 aaPredicted RBP20.51■□□□□ 0.87
TPM1-204ENST00000334895 PWP1Q13610 501 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 CUL3Q13618 768 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 HKDC1Q2TB90 917 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 ATP6AP1LQ52LC2 224 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 SPDYAQ5MJ70 313 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 DEPDC1Q5TB30 811 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 UBE3DQ7Z6J8 389 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 CCDC197Q8NCU1 140 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 WDR48Q8TAF3 677 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 C11orf24Q96F05 449 aaPredicted RBP20.51■□□□□ 0.87
TPM1-204ENST00000334895 PPP3R2Q96LZ3 170 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 ZNF285Q96NJ3 590 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 PRM3Q9NNZ6 103 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 C1orf109Q9NX04 203 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 PLCL2Q9UPR0 1127 aa20.51■□□□□ 0.87
TPM1-204ENST00000334895 FOLR1P15328 257 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 LBPP18428 481 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 INSM1Q01101 510 aaPredicted RBP20.5■□□□□ 0.87
TPM1-204ENST00000334895 OGFOD2Q6N063 350 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 CHSY3Q70JA7 882 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 ZFAND4Q86XD8 727 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 CSNK1A1LQ8N752 337 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 KCT2Q8NC54 265 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 CHTF18Q8WVB6 975 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 RERGQ96A58 199 aaPredicted RBP20.5■□□□□ 0.87
TPM1-204ENST00000334895 ZNF717Q9BY31 904 aaPredicted RBP20.5■□□□□ 0.87
TPM1-204ENST00000334895 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.5■□□□□ 0.87
TPM1-204ENST00000334895 HEY2Q9UBP5 337 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 PCDHGA1Q9Y5H4 931 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 SPTBP11277 2137 aa20.5■□□□□ 0.87
TPM1-204ENST00000334895 EIF2S1P05198 315 aaKnown RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 ARL4DP49703 201 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 RPL38P63173 70 aaKnown RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 GPR19Q15760 415 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 PHF19Q5T6S3 580 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 SLCO6A1Q86UG4 719 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 ANKS4BQ8N8V4 417 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 MS4A6EQ96DS6 147 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 MARK4Q96L34 752 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 C1orf50Q9BV19 199 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 SORBS1Q9BX66 1292 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms