RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 CASP9P55211 416 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 VBP1P61758 197 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 SLCO4C1Q6ZQN7 724 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 BTLAQ7Z6A9 289 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 HMG20AQ9NP66 347 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF282Q9UDV7 671 aaPredicted RBP22.5■■□□□ 1.19
NDEL1-201ENST00000334527 EXO1Q9UQ84 846 aaKnown RBP22.5■■□□□ 1.19
NDEL1-201ENST00000334527 PADI2Q9Y2J8 665 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 TMEM229AB2RXF0 380 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 RNASET2O00584 256 aaKnown RBP22.5■■□□□ 1.19
NDEL1-201ENST00000334527 GCM2O75603 506 aaPredicted RBP22.5■■□□□ 1.19
NDEL1-201ENST00000334527 ELFN1P0C7U0 828 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 WEE1P30291 646 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 CRATP43155 626 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 TSTA3Q13630 321 aaPredicted RBP22.5■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF385BQ569K4 471 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF805Q5CZA5 627 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 AHSA2Q719I0 299 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF557Q8N988 423 aaPredicted RBP22.5■■□□□ 1.19
NDEL1-201ENST00000334527 OR4K1Q8NGD4 311 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 SPPL2AQ8TCT8 520 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 PCDHGB3Q9Y5G1 929 aa22.5■■□□□ 1.19
NDEL1-201ENST00000334527 BOLA2-SMG1P6H3BVE0 249 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 MVKQ03426 396 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 TEAD4Q15561 434 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 CATSPEREQ5SY80 951 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 PRSS48Q7RTY5 328 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 ENTHD1Q8IYW4 607 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 ITM2BQ9Y287 266 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF451Q9Y4E5 1061 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 TESMINQ9Y4I5 508 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 FUOMA2VDF0 154 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 SOBPA7XYQ1 873 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 GRIN2CQ14957 1233 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 COX20Q5RI15 118 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 GPR153Q6NV75 609 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 LIPIQ6XZB0 460 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 OTOP2Q7RTS6 562 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 FAM124AQ86V42 546 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 SYTL1Q8IYJ3 562 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF366Q8N895 744 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF480Q8WV37 535 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 APH1BQ8WW43 257 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 IPCEF1Q8WWN9 437 aaPredicted RBP22.49■■□□□ 1.19
NDEL1-201ENST00000334527 KCNC2Q96PR1 638 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF300Q96RE9 604 aaPredicted RBP22.49■■□□□ 1.19
NDEL1-201ENST00000334527 GABARAPL3Q9BY60 117 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 AKIP1Q9NQ31 210 aa22.49■■□□□ 1.19
NDEL1-201ENST00000334527 PRRC2BQ5JSZ5 2229 aaKnown RBP22.48■■□□□ 1.19
NDEL1-201ENST00000334527 H3BM21 787 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 MRPS14O60783 128 aaKnown RBP22.48■■□□□ 1.19
NDEL1-201ENST00000334527 NADKO95544 446 aaPredicted RBP22.48■■□□□ 1.19
NDEL1-201ENST00000334527 OPN1SWP03999 348 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 GBAP04062 536 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 MMP12P39900 470 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 MAPK9P45984 424 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 GSSP48637 474 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 TBPL1P62380 186 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF852Q6ZMS4 543 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 VMP1Q96GC9 406 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 HRASLS5Q96KN8 279 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 WDR12Q9GZL7 423 aaKnown RBP22.48■■□□□ 1.19
NDEL1-201ENST00000334527 DOLKQ9UPQ8 538 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 PCDHGA6Q9Y5G7 932 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 WNT6Q9Y6F9 365 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 AP1M2Q9Y6Q5 423 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 ETFAP13804 333 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 SYN1P17600 705 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 SELENOWP63302 87 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 HBA1P69905 142 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF763Q0D2J5 394 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 EGFLAMQ63HQ2 1017 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 TSEN54Q7Z6J9 526 aaKnown RBP22.48■■□□□ 1.19
NDEL1-201ENST00000334527 REPS1Q96D71 796 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 BHLHE41Q9C0J9 482 aaPredicted RBP22.48■■□□□ 1.19
NDEL1-201ENST00000334527 REEP4Q9H6H4 257 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 SH2B3Q9UQQ2 575 aa22.48■■□□□ 1.19
NDEL1-201ENST00000334527 E9PQ18 207 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 MOSPD3O75425 235 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 C1orf105O95561 183 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 CCL5P13501 91 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 CSF2RAP15509 400 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF8P17098 575 aaPredicted RBP22.47■■□□□ 1.19
NDEL1-201ENST00000334527 TNFRSF1BP20333 461 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 DGUOKQ16854 277 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 Q6ZPB1 254 aaPredicted RBP22.47■■□□□ 1.19
NDEL1-201ENST00000334527 KIAA0907Q7Z7F0 614 aaPredicted RBP22.47■■□□□ 1.19
NDEL1-201ENST00000334527 LMNTD1Q8N9Z9 388 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 DNASE1L2Q92874 299 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 CXorf40BQ96DE9 158 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 WRAP53Q9BUR4 548 aaKnown RBP22.47■■□□□ 1.19
NDEL1-201ENST00000334527 GPATCH2Q9NW75 528 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 NDUFAF4Q9P032 175 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 ATP6V1HQ9UI12 483 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 LYVE1Q9Y5Y7 322 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 TNFRSF11BO00300 401 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 ZNF197O14709 1029 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 RFPL2O75678 378 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 MVDP53602 400 aa22.47■■□□□ 1.19
NDEL1-201ENST00000334527 NCS1P62166 190 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms