RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 NPAS3Q8IXF0 933 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 FCGR1BQ92637 280 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 DOCK6Q96HP0 2047 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 DSN1Q9H410 356 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 BRF2Q9HAW0 419 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.8□□□□□ -0.04
BRCC3-201ENST00000330045 AP1M2Q9Y6Q5 423 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 CXorf51AA0A1B0GTR3 108 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 OR2AG2A6NM03 316 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 URODP06132 367 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 PCGF2P35227 344 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 GSSP48637 474 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 CLK1P49759 484 aaKnown RBP14.8□□□□□ -0.04
BRCC3-201ENST00000330045 POLR2LP62875 67 aaKnown RBP14.8□□□□□ -0.04
BRCC3-201ENST00000330045 SLC7A9P82251 487 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 FPGSQ05932 587 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 CD300CQ08708 224 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 ELP6Q0PNE2 266 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.8□□□□□ -0.04
BRCC3-201ENST00000330045 AGTRAPQ6RW13 159 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 Q6ZPB1 254 aaPredicted RBP14.8□□□□□ -0.04
BRCC3-201ENST00000330045 PLEKHG7Q6ZR37 379 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 CADM3Q8N126 398 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 NAGSQ8N159 534 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 CHST14Q8NCH0 376 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 RHOXF1Q8NHV9 184 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 SPPL2AQ8TCT8 520 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 ATL1Q8WXF7 558 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 BADQ92934 168 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 PSD2Q9BQI7 771 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 CEP44Q9C0F1 390 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 FAM83DQ9H4H8 585 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 SLCO3A1Q9UIG8 710 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 SLC25A13Q9UJS0 675 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 DENND4CQ5VZ89 1909 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 A0A1W2PQ67 120 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 MGAT4DA6NG13 374 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 TMEM229AB2RXF0 380 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 TNFRSF11BO00300 401 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 PSIP1O75475 530 aaKnown RBP14.79□□□□□ -0.04
BRCC3-201ENST00000330045 IDSP22304 550 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 LIPAP38571 399 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 EIF2B2P49770 351 aaKnown RBP14.79□□□□□ -0.04
BRCC3-201ENST00000330045 PPP5CP53041 499 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 SELENOWP63302 87 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 GAB1Q13480 694 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 TEAD4Q15561 434 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 CATSPEREQ5SY80 951 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 ADNP2Q6IQ32 1131 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 CAMKMTQ7Z624 323 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 C11orf65Q8NCR3 313 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 MCFD2Q8NI22 146 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 FEVQ99581 238 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 HERC2P3Q9BVR0 1158 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 DCSTAMPQ9H295 470 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 ANKHQ9HCJ1 492 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 TMEM184CQ9NVA4 438 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 SH3BP4Q9P0V3 963 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 STOX2Q9P2F5 926 aaPredicted RBP14.79□□□□□ -0.04
BRCC3-201ENST00000330045 PSORS1C1Q9UIG5 152 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 MAPRE3Q9UPY8 281 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 ZNF451Q9Y4E5 1061 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 TESMINQ9Y4I5 508 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 LYVE1Q9Y5Y7 322 aa14.79□□□□□ -0.04
BRCC3-201ENST00000330045 TMEM202A6NGA9 273 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 GRM6O15303 877 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 AIREO43918 545 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 GCM2O75603 506 aaPredicted RBP14.78□□□□□ -0.04
BRCC3-201ENST00000330045 AP2A2O94973 939 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 ABCB1P08183 1280 aaPredicted RBP14.78□□□□□ -0.04
BRCC3-201ENST00000330045 C21orf33P30042 268 aaPredicted RBP14.78□□□□□ -0.04
BRCC3-201ENST00000330045 GGT2P36268 569 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 TUBA1BP68363 451 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 ZNF648Q5T619 568 aaPredicted RBP14.78□□□□□ -0.04
BRCC3-201ENST00000330045 AGAP7PQ5VUJ5 663 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 GDPD4Q6W3E5 623 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 Q6ZVU0 165 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 TUBA1AQ71U36 451 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 TSEN54Q7Z6J9 526 aaKnown RBP14.78□□□□□ -0.04
BRCC3-201ENST00000330045 OR4A15Q8NGL6 344 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 PROX1Q92786 737 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 COQ8BQ96D53 544 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 DACH2Q96NX9 599 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 OR4K3Q96R72 315 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 PLCXD1Q9NUJ7 323 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 NDUFAF4Q9P032 175 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 ZNF282Q9UDV7 671 aaPredicted RBP14.78□□□□□ -0.04
BRCC3-201ENST00000330045 ADAMDEC1O15204 470 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 PCDH7O60245 1069 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 RFPL2O75678 378 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 FGF18O76093 207 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 INAVAQ3KP66 663 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 CCSMST1Q4G0I0 132 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 PRSS36Q5K4E3 855 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 HSD11B1LQ7Z5J1 315 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 DDX53Q86TM3 631 aaKnown RBP14.78□□□□□ -0.04
BRCC3-201ENST00000330045 GPR156Q8NFN8 814 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 OR7G3Q8NG95 312 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 CHTF18Q8WVB6 975 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 MYDGFQ969H8 173 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms