RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MYLK3Q32MK0 819 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 ERMP1Q7Z2K6 904 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 GLB1L3Q8NCI6 653 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 NXPE2Q96DL1 559 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 IKZF4Q9H2S9 585 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 MMP27Q9H306 513 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 BCAS3Q9H6U6 928 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 FARSBQ9NSD9 589 aaKnown RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 POFUT2Q9Y2G5 429 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 TNRC6CQ9HCJ0 1690 aaKnown RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 MYOCOSA0A1B0GUC4 107 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 GJA1P17302 382 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 VAMP1P23763 118 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 ZNF155Q12901 538 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 CLEC12AQ5QGZ9 265 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 C9orf50Q5SZB4 431 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 TRMT10BQ6PF06 316 aaKnown RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 C6orf89Q6UWU4 347 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CCDC54Q8NEL0 328 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 STYXQ8WUJ0 223 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 SLC7A6OSQ96CW6 309 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 MYO19Q96H55 970 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CDX2Q99626 313 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 MIPEPQ99797 713 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 RIOK2Q9BVS4 552 aaKnown RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 CTPS2Q9NRF8 586 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CYTH4Q9UIA0 394 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 SCML1Q9UN30 329 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CENPBD1B2RD01 187 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 HTRA2O43464 458 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 CRYZL1O95825 349 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 GADD45AP24522 165 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 EDNRAP25101 427 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 MCCD1P59942 119 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 ATXN7L3Q14CW9 347 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 SOWAHAQ2M3V2 549 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 GXYLT1Q4G148 440 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CRB2Q5IJ48 1285 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 ARL9Q6T311 187 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 KCTD9Q7L273 389 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 COMMD7Q86VX2 200 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 SIDT2Q8NBJ9 832 aaKnown RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 DCAKDQ8WVC6 231 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 JPH3Q8WXH2 748 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 COQ8BQ96D53 544 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 COL21A1Q96P44 957 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 HAPLN3Q96S86 360 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 FGFBP2Q9BYJ0 223 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 SMURF2Q9HAU4 748 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 OSER1Q9NX31 292 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 HMGXB4Q9UGU5 601 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 FBXL3Q9UKT7 428 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 KCNIP3Q9Y2W7 256 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 GLYATL1P3A0A0U1RQE8 302 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 ZNF208O43345 1280 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CLIC3O95833 236 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 FOSL1P15407 271 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 AOC1P19801 751 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 IDSP22304 550 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 IGFALSP35858 605 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 GRIA1P42261 906 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CREB5Q02930 508 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 SLC3A1Q07837 685 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 LSAMPQ13449 338 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 SCARB2Q14108 478 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CTC1Q2NKJ3 1217 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CLLU1OSQ5K130 101 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 MED27Q6P2C8 311 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 TMCO2Q7Z6W1 182 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 OR6K2Q8NGY2 324 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 OR10G6Q8NH81 332 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 ESAMQ96AP7 390 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 AURKBQ96GD4 344 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 NDUFAF4Q9P032 175 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 YARS2Q9Y2Z4 477 aaKnown RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 KHNYNO15037 678 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 PRAMEF12O95522 483 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 LATS1O95835 1130 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 VIPP01282 170 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 FCER2P06734 321 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 DAOAP59103 153 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 HNRNPA0Q13151 305 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 PUM1Q14671 1186 aaKnown RBP eCLIP7.93□□□□□ -1.14
VPS41-202ENST00000310301 OR2T5Q6IEZ7 315 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 OR6K6Q8NGW6 343 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 OR2T29Q8NH02 315 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SPATA22Q8NHS9 363 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ZNF649Q9BS31 505 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 RPF2Q9H7B2 306 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 TAS2R9Q9NYW1 312 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 HCN3Q9P1Z3 774 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ZNF282Q9UDV7 671 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 TLR6Q9Y2C9 796 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 PLEKHA6Q9Y2H5 1048 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SSX5O60225 188 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 RASGRP1O95267 797 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 GOT2P00505 430 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 HOXA9P31269 272 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 MAP3K8P41279 467 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms