RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SERPINB5P36952 375 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 GCGRP47871 477 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 PPP2R2AP63151 447 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 PHEXP78562 749 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 IFT88Q13099 833 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 RCN2Q14257 317 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 VN1R5Q7Z5H4 357 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 HUS1BQ8NHY5 278 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 C10orf90Q96M02 699 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 LRFN5Q96NI6 719 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 TMEM121BQ9BXQ6 578 aaPredicted RBP23.31■■□□□ 1.32
HOXC9-201ENST00000303450 SHCBP1LQ9BZQ2 653 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 ELOVL6Q9H5J4 265 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 EML4Q9HC35 981 aaKnown RBP23.31■■□□□ 1.32
HOXC9-201ENST00000303450 MED4Q9NPJ6 270 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 DKK4Q9UBT3 224 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 TSC22D4Q9Y3Q8 395 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 TEX51A0A1B0GUA7 166 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 URADA6NGE7 173 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.3■■□□□ 1.32
HOXC9-201ENST00000303450 DSCR3O14972 297 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 CRCPO75575 148 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 SERPINE1P05121 402 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 ENO1P06733 434 aaKnown RBP23.3■■□□□ 1.32
HOXC9-201ENST00000303450 CAPN1P07384 714 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 CCNYL3P0C7X3 344 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 FOXK2Q01167 660 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 C1orf189Q5VU69 101 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 FRG2Q64ET8 278 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 TMEM214Q6NUQ4 689 aaKnown RBP23.3■■□□□ 1.32
HOXC9-201ENST00000303450 NLGN4XQ8N0W4 816 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 NLGN4YQ8NFZ3 816 aaPredicted RBP23.3■■□□□ 1.32
HOXC9-201ENST00000303450 ZCCHC10Q8TBK6 192 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 METTL6Q8TCB7 284 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 ZNF473Q8WTR7 871 aaKnown RBP23.3■■□□□ 1.32
HOXC9-201ENST00000303450 FRG2BQ96QU4 278 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 MTERF1Q99551 399 aaKnown RBP23.3■■□□□ 1.32
HOXC9-201ENST00000303450 SNX6Q9UNH7 406 aa23.3■■□□□ 1.32
HOXC9-201ENST00000303450 A0A1B0GX78 115 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 MEN1O00255 615 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 BGNP21810 368 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 HMOX2P30519 316 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 PIK3CBP42338 1070 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 PCBP4P57723 403 aaKnown RBP23.29■■□□□ 1.32
HOXC9-201ENST00000303450 STXBP1P61764 594 aaKnown RBP23.29■■□□□ 1.32
HOXC9-201ENST00000303450 ARL13AQ5H913 290 aaPredicted RBP23.29■■□□□ 1.32
HOXC9-201ENST00000303450 TIPARPQ7Z3E1 657 aaKnown RBP23.29■■□□□ 1.32
HOXC9-201ENST00000303450 ESX1Q8N693 406 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 OR6Y1Q8NGX8 325 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 WDR20Q8TBZ3 569 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 PROKR1Q8TCW9 393 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 MTFMTQ96DP5 389 aaKnown RBP23.29■■□□□ 1.32
HOXC9-201ENST00000303450 SLC29A3Q9BZD2 475 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 SLC6A16Q9GZN6 736 aa23.29■■□□□ 1.32
HOXC9-201ENST00000303450 RAD1O60671 282 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 GRK2P25098 689 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 RORAP35398 523 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 NEK2P51955 445 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 ABHD18Q0P651 414 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 HYAL2Q12891 473 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 FAM53BQ14153 422 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 MAP7Q14244 749 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 TOR1AIP1Q5JTV8 583 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 C10orf62Q5T681 223 aaPredicted RBP23.28■■□□□ 1.32
HOXC9-201ENST00000303450 UNQ6494/PRO21346Q6UXR6 183 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 CUZD1Q86UP6 607 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 DSELQ8IZU8 1212 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 ARHGEF39Q8N4T4 335 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 PADI1Q9ULC6 663 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 SLC22A7Q9Y694 548 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 ASPMQ8IZT6 3477 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 LRIT2A6NDA9 550 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 C1QTNF9BB2RNN3 333 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 MED26O95402 600 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 KRT6AP02538 564 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 KRT6BP04259 564 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 CHRNGP07510 517 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 C1QTNF9P0C862 333 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 LIPCP11150 499 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 NR1D1P20393 614 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 AGXTP21549 392 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 KRT6CP48668 564 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 ATP1A2P50993 1020 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 GALNT1Q10472 559 aaPredicted RBP23.28■■□□□ 1.32
HOXC9-201ENST00000303450 SGO1Q5FBB7 561 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 ABHD13Q7L211 337 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 RNF175Q8N4F7 328 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 METTL27Q8N6F8 245 aaPredicted RBP23.28■■□□□ 1.32
HOXC9-201ENST00000303450 SELENOMQ8WWX9 145 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 MR1Q95460 341 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 MVB12AQ96EY5 273 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 CMTM7Q96FZ5 175 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 GBP5Q96PP8 586 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 KCNA7Q96RP8 456 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 DPH2Q9BQC3 489 aaPredicted RBP23.28■■□□□ 1.32
HOXC9-201ENST00000303450 REXO4Q9GZR2 422 aaKnown RBP23.28■■□□□ 1.32
HOXC9-201ENST00000303450 KLHL31Q9H511 634 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 LHX9Q9NQ69 397 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 DMRT3Q9NQL9 472 aa23.28■■□□□ 1.32
HOXC9-201ENST00000303450 MRPS2Q9Y399 296 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms