RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RAB12Q6IQ22 244 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CCDC80Q76M96 950 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 C14orf80Q86SX3 495 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PAQR7Q86WK9 346 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CASTOR1Q8WTX7 329 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ORAI3Q9BRQ5 295 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 POFUT2Q9Y2G5 429 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MEMO1Q9Y316 297 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ANKRD66B4E2M5 251 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MAGEA2P43356 314 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RHDQ02161 417 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CBLBQ13191 982 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DRICH1Q6PGQ1 229 aaPredicted RBP13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OR2AP1Q8NGE2 309 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OR2L2Q8NH16 312 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SUSD3Q96L08 255 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 IL21RQ9HBE5 538 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 THUMPD1Q9NXG2 353 aaKnown RBP13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CREG1O75629 220 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SMSP52788 366 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ANKDD1AQ495B1 522 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SFT2D3Q587I9 215 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TFGQ92734 400 aaPredicted RBP13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GMEB1Q9Y692 573 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CKMT1AP12532 417 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ANXA8P13928 327 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MAP2K4P45985 399 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 HCAR3P49019 387 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC11A1P49279 550 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 LRRC37A5PQ49AS3 106 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ARSJQ5FYB0 599 aaPredicted RBP13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ANO7Q6IWH7 933 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TICAM1Q8IUC6 712 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 EZH1Q92800 747 aaPredicted RBP13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZNF700Q9H0M5 742 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZNF226Q9NYT6 803 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DUXAA6NLW8 204 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC33A1O00400 549 aaPredicted RBP13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SNU13P55769 128 aaKnown RBP13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GXYLT1Q4G148 440 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC30A8Q8IWU4 369 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC37A3Q8NCC5 494 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TTLQ8NG68 377 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FANK1Q8TC84 345 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC5A11Q8WWX8 675 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TSSK6Q9BXA6 273 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DKK3Q9UBP4 350 aa13.15□□□□□ -0.3
CHRFAM7A-201ENST00000299847 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ARVCFO00192 962 aa13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CCRL2O00421 344 aa13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 APLP1P51693 650 aa13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 EEFSECP57772 596 aaKnown RBP13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PCLAFQ15004 111 aa13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 OCLNQ16625 522 aa13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC35B2Q8TB61 432 aa13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BRI3BPQ8WY22 251 aa13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NSUN5Q96P11 429 aaKnown RBP13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NOP16Q9Y3C1 178 aaKnown RBP13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CMAHPQ9Y471 501 aa13.15□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C9J4A7 227 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 LEFTY2O00292 366 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 E2F3O00716 465 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HOXB2P14652 356 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GMPRP36959 345 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SOX2P48431 317 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MFSD2AQ8NA29 543 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CAMKVQ8NCB2 501 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 LRCH3Q96II8 777 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MS4A12Q9NXJ0 267 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PTTG2Q9NZH5 202 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ITGB1BP2Q9UKP3 347 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BCL9LQ86UU0 1499 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FEZF1A0PJY2 475 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ILVBLA1L0T0 632 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 KDELR3O43731 214 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BMP8BP34820 402 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 EPGNQ6UW88 154 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FCGR1BQ92637 280 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C14orf105Q9NVL8 296 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 EDDM13A0A1B0GTR0 161 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ABLIM1O14639 778 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CLRN1P58418 232 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM126BQ8IUX1 230 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 WFIKKN2Q8TEU8 576 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BRF2Q9HAW0 419 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 USP29Q9HBJ7 922 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PSAT1Q9Y617 370 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CSF2P04141 144 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CCL5P13501 91 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ATF6P18850 670 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 STK19P49842 368 aaPredicted RBP13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 VSX2P58304 361 aaPredicted RBP13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MAD2L1BPQ15013 274 aaPredicted RBP13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CNIH3Q8TBE1 160 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF285Q96NJ3 590 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 OR8D2Q9GZM6 311 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SDHAF3Q9NRP4 125 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 LAMP5Q9UJQ1 280 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms