RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TREX2Q9BQ50 279 aaPredicted RBP14.43□□□□□ -0.1
SCN3B-201ENST00000299333 TSSK6Q9BXA6 273 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 VPS29Q9UBQ0 182 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 C2CD4BA6NLJ0 364 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 TGFB1P01137 390 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 CHRNA1P02708 482 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 GALNT1Q10472 559 aaPredicted RBP14.42□□□□□ -0.1
SCN3B-201ENST00000299333 DUSP4Q13115 394 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 TAF1AQ15573 450 aaPredicted RBP14.42□□□□□ -0.1
SCN3B-201ENST00000299333 FAM122CQ6P4D5 195 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 METTL21AQ8WXB1 218 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 SMPDL3BQ92485 455 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 OR5B12Q96R08 314 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 XPNPEP1Q9NQW7 623 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 ADAMTS6Q9UKP5 1117 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 A0A1B0GV50 99 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 RCBTB2O95199 551 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 GABRR2P28476 465 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 RBMXP38159 391 aaKnown RBP14.42□□□□□ -0.1
SCN3B-201ENST00000299333 NR4A2P43354 598 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 TFAP2BQ92481 460 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 HEPHQ9BQS7 1158 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 BTBD1Q9H0C5 482 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 ABCB8Q9NUT2 735 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 POT1Q9NUX5 634 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 FBXL21Q9UKT6 434 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 MYPNQ86TC9 1320 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 HCKP08631 526 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 PRKCAP17252 672 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 CDK6Q00534 326 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 PLEKHG7Q6ZR37 379 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF367Q7RTV3 350 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 PLPPR4Q7Z2D5 763 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 NEIL3Q8TAT5 605 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 TMEM41AQ96HV5 264 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 PCDHGB5Q9Y5G0 923 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 CCDC163A0A0D9SF12 145 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 KLF11O14901 512 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 L1CAMP32004 1257 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 SLC18A1P54219 525 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 HADHBP55084 474 aaKnown RBP14.42□□□□□ -0.1
SCN3B-201ENST00000299333 YBEYP58557 167 aaPredicted RBP14.42□□□□□ -0.1
SCN3B-201ENST00000299333 PON3Q15166 354 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 DCAF12L1Q5VU92 463 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 PAPD4Q6PIY7 484 aaKnown RBP14.42□□□□□ -0.1
SCN3B-201ENST00000299333 CXCL17Q6UXB2 119 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 PSD4Q8NDX1 1056 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 SLC6A7Q99884 636 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 SYT4Q9H2B2 425 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 DPEP3Q9H4B8 488 aa14.42□□□□□ -0.1
SCN3B-201ENST00000299333 FUOMA2VDF0 154 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 GABRDO14764 452 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 VILLO15195 856 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 B3GALT2O43825 422 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 HTR1AP08908 422 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 PABPC4LP0CB38 370 aaKnown RBP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 CXCR1P25024 350 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 CCND3P30281 292 aaPredicted RBP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 MPIP34949 423 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF616Q08AN1 781 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF674Q2M3X9 581 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 MFSD2AQ8NA29 543 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 OR13C4Q8NGS5 318 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 TESCQ96BS2 214 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 LGALS12Q96DT0 336 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 ZFR2Q9UPR6 939 aaKnown RBP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 A0A1W2PP18 115 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 M0R129 80 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 MT-ND5P03915 603 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 CYP17A1P05093 508 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 SPATA31D3P0C874 917 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 KELP23276 732 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 CD52P31358 61 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 EIF1AXP47813 144 aaKnown RBP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 SPATA31D4Q6ZUB0 917 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 RPS27LQ71UM5 84 aaKnown RBP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 TAC4Q86UU9 113 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF709Q8N972 641 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 FAIMQ9NVQ4 179 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 GALPQ9UBC7 116 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 EIF1AYO14602 144 aaKnown RBP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 NIPSNAP2O75323 286 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 ASGR1P07306 291 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 ELP2Q6IA86 826 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 LCN9Q8WX39 176 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 EXOSC1Q9Y3B2 195 aaKnown RBP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 PCDHGB2Q9Y5G2 931 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 G6PDP11413 515 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 BCKDHAP12694 445 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 IL4RP24394 825 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 NSG1P42857 185 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 PSMD8P48556 350 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 KCNAB2Q13303 367 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 APOBEC3HQ6NTF7 200 aaKnown RBP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 GALNT13Q8IUC8 556 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 TMEM126BQ8IUX1 230 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 PRSS58Q8IYP2 241 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 SLC15A4Q8N697 577 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF510Q9Y2H8 683 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms