RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 TMEM236Q5W0B7 351 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 ZNF776Q68DI1 518 aaPredicted RBP6.42□□□□□ -1.38
TMC1-201ENST00000297784 CCBE1Q6UXH8 406 aaPredicted RBP6.42□□□□□ -1.38
TMC1-201ENST00000297784 RPS27LQ71UM5 84 aaKnown RBP6.42□□□□□ -1.38
TMC1-201ENST00000297784 PAGE2Q7Z2X7 111 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 VN1R5Q7Z5H4 357 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 VRK3Q8IV63 474 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 ZNF547Q8IVP9 402 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 UBQLNLQ8IYU4 475 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 MIER2Q8N344 545 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 LSMEM1Q8N8F7 131 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 GLYATL1Q969I3 302 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 TSPAN17Q96FV3 270 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 ATOH8Q96SQ7 321 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 COPS8Q99627 209 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 KCTD14Q9BQ13 255 aaPredicted RBP6.42□□□□□ -1.38
TMC1-201ENST00000297784 DERL2Q9GZP9 239 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 EPS8L2Q9H6S3 715 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 ALG9Q9H6U8 611 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 TNFRSF12AQ9NP84 129 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 MMP17Q9ULZ9 603 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 VPS9D1Q9Y2B5 631 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 PCDHB1Q9Y5F3 818 aa6.42□□□□□ -1.38
TMC1-201ENST00000297784 ZFC3H1O60293 1989 aaKnown RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 B8ZZF3 427 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 TSPAN6O43657 245 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 IPO13O94829 963 aaKnown RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 MTHFD1P11586 935 aaKnown RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 JUNDP17535 347 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 HRH2P25021 359 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 ACSL1P33121 698 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 ETV6P41212 452 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SLC12A2P55011 1212 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 STARD6P59095 220 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 CXCR4P61073 352 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 PPP2R2BQ00005 443 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 TMEM115Q12893 351 aaPredicted RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 GBX1Q14549 363 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 IMPG1Q17R60 797 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 FAM83EQ2M2I3 478 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 CDONQ4KMG0 1287 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 PYCR3Q53H96 274 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 YIF1BQ5BJH7 314 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 ZC3H12BQ5HYM0 836 aaKnown RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 LYPLAL1Q5VWZ2 237 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SLC51BQ86UW2 128 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SLC22A9Q8IVM8 553 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 CLYBLQ8N0X4 340 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 METTL4Q8N3J2 472 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SVOPLQ8N434 492 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 MAFAQ8NHW3 353 aaPredicted RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 MCFD2Q8NI22 146 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 TMBIM1Q969X1 311 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 NUS1Q96E22 293 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 COX14Q96I36 57 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 DYRK4Q9NR20 520 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 STMN3Q9NZ72 180 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 OPTCQ9UBM4 332 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 KCNN3Q9UGI6 736 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 COMMD10Q9Y6G5 202 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 OR2AG2A6NM03 316 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 CENPXA8MT69 81 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SLC16A6O15403 523 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 TRIM16O95361 564 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 PAK4O96013 591 aaPredicted RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 NPPAP01160 153 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 RAP2AP10114 183 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 AOAHP28039 575 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 TPMTP51580 245 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 DEFA1P59665 94 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 DEFA3P59666 94 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 VBP1P61758 197 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 PPP2CBP62714 309 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 PPP2CAP67775 309 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 LIPEQ05469 1076 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 GRIK2Q13002 908 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 ZXDCQ2QGD7 858 aaPredicted RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 PUS10Q3MIT2 529 aaKnown RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 ZNF404Q494X3 552 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 FBXO43Q4G163 708 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 OTUD3Q5T2D3 398 aaPredicted RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 AGAP9Q5VTM2 703 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SDE2Q6IQ49 451 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 BLOC1S3Q6QNY0 202 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SBSNQ6UWP8 590 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 ZNF852Q6ZMS4 543 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 IDO2Q6ZQW0 420 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 ZNF765Q7L2R6 523 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 GDPD3Q7L5L3 318 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 PHYKPLQ8IUZ5 450 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 CCDC103Q8IW40 242 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SLC38A6Q8IZM9 456 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SIX5Q8N196 739 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 CLEC4FQ8N1N0 589 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 LILRA3Q8N6C8 439 aaPredicted RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 FRMD1Q8N878 549 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 TP53I13Q8NBR0 393 aaPredicted RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 RHEBL1Q8TAI7 183 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 FIG4Q92562 907 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 MARVELD3Q96A59 401 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms