RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TRIP13Q15645 432 aaPredicted RBP8.75□□□□□ -1.01
CNOT9-202ENST00000295701 ACER2Q5QJU3 275 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 MRNIPQ6NTE8 343 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 H3F3CQ6NXT2 135 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 ZNF549Q6P9A3 640 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 XKRXQ6PP77 449 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 C3P1Q6ZMU1 363 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 ANKRD37Q7Z713 158 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 SDCCAG8Q86SQ7 713 aaPredicted RBP8.75□□□□□ -1.01
CNOT9-202ENST00000295701 PDSS2Q86YH6 399 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 KCT2Q8NC54 265 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 MDS2Q8NDY4 140 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 OR51Q1Q8NH59 317 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 ZCCHC10Q8TBK6 192 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 METTL21AQ8WXB1 218 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 RBCK1Q9BYM8 510 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 FRMD8P1Q9BZ68 369 aaPredicted RBP8.75□□□□□ -1.01
CNOT9-202ENST00000295701 KCNK13Q9HB14 408 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 CHST11Q9NPF2 352 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 EIF2B3Q9NR50 452 aaKnown RBP8.75□□□□□ -1.01
CNOT9-202ENST00000295701 FBXO6Q9NRD1 293 aaPredicted RBP8.75□□□□□ -1.01
CNOT9-202ENST00000295701 GUCA1BQ9UMX6 200 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 SOX13Q9UN79 622 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 NPIPA1Q9UND3 350 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 ZNF835Q9Y2P0 537 aa8.75□□□□□ -1.01
CNOT9-202ENST00000295701 ZNF469Q96JG9 3925 aaPredicted RBP8.75□□□□□ -1.01
CNOT9-202ENST00000295701 ZNF860A6NHJ4 632 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 E5RI56 91 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 H0YIG0 161 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 H3BMM5 538 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 M0R082 166 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 TTI1O43156 1089 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 PHF2O75151 1096 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 RDH16O75452 317 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 CDC123O75794 336 aaPredicted RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 CCNDBP1O95273 360 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 B3GALT4O96024 378 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 CATP04040 527 aaKnown RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 ESRRAP11474 423 aaPredicted RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 EZRP15311 586 aaKnown RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 COILP38432 576 aaPredicted RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 ADH7P40394 386 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 XCR1P46094 333 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 AVPR1BP47901 424 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 ALDH6A1Q02252 535 aaKnown RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 RBPJQ06330 500 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 CTBP1Q13363 440 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 NAA25Q14CX7 972 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 OR1C1Q15619 314 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 CCNG2Q16589 344 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 NDUFA9Q16795 377 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 THEMIS2Q5TEJ8 643 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 ANKRD22Q5VYY1 191 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 PLAG1Q6DJT9 500 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 NEPROQ6NW34 567 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 RPTNQ6XPR3 784 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 MBOAT1Q6ZNC8 495 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 FGD2Q7Z6J4 655 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 SPPL2CQ8IUH8 684 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 CILP2Q8IUL8 1156 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 DENND6AQ8IWF6 608 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 CHERPQ8IWX8 916 aaKnown RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 KIF2BQ8N4N8 673 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 PRELID2Q8N945 189 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 OR5T3Q8NGG3 340 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 ZNF417Q8TAU3 575 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 ASB11Q8WXH4 323 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 TSLPQ969D9 159 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 MTFMTQ96DP5 389 aaKnown RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 ZNF354BQ96LW1 612 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 GPR137Q96N19 417 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 ZNF587Q96SQ5 575 aaPredicted RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 TCF12Q99081 682 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 FAM114A2Q9NRY5 505 aa8.74□□□□□ -1.01
CNOT9-202ENST00000295701 DRG1Q9Y295 367 aaKnown RBP8.74□□□□□ -1.01
CNOT9-202ENST00000295701 SETD2Q9BYW2 2564 aaPredicted RBP8.73□□□□□ -1.01
CNOT9-202ENST00000295701 SPG11Q96JI7 2443 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 GFYI3L273 518 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 TXNDC9O14530 226 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 KRT38O76015 456 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 NSA2O95478 260 aaKnown RBP8.73□□□□□ -1.01
CNOT9-202ENST00000295701 CLDN14O95500 239 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 OGNP20774 298 aaKnown RBP8.73□□□□□ -1.01
CNOT9-202ENST00000295701 BCL6P41182 706 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 VPS41P49754 854 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 ADARP55265 1226 aaKnown RBP8.73□□□□□ -1.01
CNOT9-202ENST00000295701 RIPPLY3P57055 190 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 CSNK1G2P78368 415 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 ABATP80404 500 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 RHAGQ02094 409 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 LONRF1Q17RB8 773 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 SFT2D3Q587I9 215 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 MEI1Q5TIA1 1274 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 KIAA0930Q6ICG6 404 aaPredicted RBP8.73□□□□□ -1.01
CNOT9-202ENST00000295701 MTFR2Q6P444 385 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 PAPD4Q6PIY7 484 aaKnown RBP8.73□□□□□ -1.01
CNOT9-202ENST00000295701 Q6ZPB1 254 aaPredicted RBP8.73□□□□□ -1.01
CNOT9-202ENST00000295701 GSTA5Q7RTV2 222 aa8.73□□□□□ -1.01
CNOT9-202ENST00000295701 PIWIL4Q7Z3Z4 852 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms