RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CCDC166P0CW27 439 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 NPPBP16860 134 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 STMN1P16949 149 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 CXCR2P25025 360 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 STX2P32856 288 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 GP5P40197 560 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 MAGEA4P43358 317 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 XCR1P46094 333 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 ST13P50502 369 aaKnown RBP9.26□□□□□ -0.93
CCDC58-201ENST00000291458 REEP5Q00765 189 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 Q0VFX4 171 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 AIMP2Q13155 320 aaKnown RBP9.26□□□□□ -0.93
CCDC58-201ENST00000291458 RBBP5Q15291 538 aaKnown RBP9.26□□□□□ -0.93
CCDC58-201ENST00000291458 PPP1R3AQ16821 1122 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 RAPH1Q70E73 1250 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 ADAMTSL2Q86TH1 951 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 SIRT6Q8N6T7 355 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 MFSD9Q8NBP5 474 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 CAMKVQ8NCB2 501 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 OR56A3Q8NH54 315 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 SLC13A3Q8WWT9 602 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 ATL1Q8WXF7 558 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 ESAMQ96AP7 390 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 TSPAN17Q96FV3 270 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 PEX11GQ96HA9 241 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 SMAD5Q99717 465 aaKnown RBP9.26□□□□□ -0.93
CCDC58-201ENST00000291458 RHBGQ9H310 441 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 ZNF552Q9H707 407 aaPredicted RBP9.26□□□□□ -0.93
CCDC58-201ENST00000291458 ANKHQ9HCJ1 492 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 MLXIPLQ9NP71 852 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 MKKSQ9NPJ1 570 aaPredicted RBP9.26□□□□□ -0.93
CCDC58-201ENST00000291458 C14orf105Q9NVL8 296 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 CD274Q9NZQ7 290 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 SLC22A14Q9Y267 594 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 NAALAD2Q9Y3Q0 740 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 OARD1Q9Y530 152 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 SHANK1Q9Y566 2161 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 CTAGE15A4D2H0 777 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 SEC24DO94855 1032 aaPredicted RBP9.25□□□□□ -0.93
CCDC58-201ENST00000291458 SORBS2O94875 1100 aaKnown RBP9.25□□□□□ -0.93
CCDC58-201ENST00000291458 HPP00738 406 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 S100BP04271 92 aaPredicted RBP9.25□□□□□ -0.93
CCDC58-201ENST00000291458 COX6A1P12074 109 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 GNLYP22749 145 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 HRH2P25021 359 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 SLC26A3P40879 764 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 HSPA7P48741 367 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 EFNA3P52797 238 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 POU4F1Q01851 419 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 CAV1Q03135 178 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 SLBPQ14493 270 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC58-201ENST00000291458 OR4D1Q15615 310 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 DEFB134Q4QY38 66 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 TOR1AIP1Q5JTV8 583 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 GARNL3Q5VVW2 1013 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 TMEM214Q6NUQ4 689 aaKnown RBP9.25□□□□□ -0.93
CCDC58-201ENST00000291458 CTAGE6Q86UF2 777 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 ATCAYQ86WG3 371 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 PDSS2Q86YH6 399 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 ZADH2Q8N4Q0 377 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 ARHGEF39Q8N4T4 335 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 TBC1D19Q8N5T2 526 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 Q8NA96 180 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 NOA1Q8NC60 698 aaKnown RBP9.25□□□□□ -0.93
CCDC58-201ENST00000291458 OR51Q1Q8NH59 317 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 UHMK1Q8TAS1 419 aaKnown RBP9.25□□□□□ -0.93
CCDC58-201ENST00000291458 BRIX1Q8TDN6 353 aaKnown RBP9.25□□□□□ -0.93
CCDC58-201ENST00000291458 IFT81Q8WYA0 676 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 MIB2Q96AX9 1013 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 C19orf60Q96EN9 201 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 MVB12AQ96EY5 273 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 VPS50Q96JG6 964 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 GPR22Q99680 433 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 TMEM79Q9BSE2 394 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 VN1R1Q9GZP7 353 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 ALG9Q9H6U8 611 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 LRRC4CQ9HCJ2 640 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 PTGFRNQ9P2B2 879 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 BOD1L1Q8NFC6 3051 aa9.25□□□□□ -0.93
CCDC58-201ENST00000291458 CPAMD8Q8IZJ3 1885 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 TRBC2A0A5B9 178 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 C4orf51C9J302 202 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 CCNT2O60583 730 aaKnown RBP9.24□□□□□ -0.93
CCDC58-201ENST00000291458 DNAJB6O75190 326 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 VPS4BO75351 444 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 SH3BGRLO75368 114 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 NSA2O95478 260 aaKnown RBP9.24□□□□□ -0.93
CCDC58-201ENST00000291458 ACSL3O95573 720 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 ONECUT2O95948 504 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 C8orf89P0DMQ9 161 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 CD1DP15813 335 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 SPRP35270 261 aaPredicted RBP9.24□□□□□ -0.93
CCDC58-201ENST00000291458 GLRBP48167 497 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 RAB8AP61006 207 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 RAB10P61026 200 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 IRF9Q00978 393 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 RGS1Q08116 209 aa9.24□□□□□ -0.93
CCDC58-201ENST00000291458 MRPL49Q13405 166 aaKnown RBP9.24□□□□□ -0.93
CCDC58-201ENST00000291458 INPP5JQ15735 1006 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms