RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SLC22A7Q9Y694 548 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 TENM4Q6N022 2769 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 GCN1Q92616 2671 aaKnown RBP8.7□□□□□ -1.02
HMGN1-201ENST00000288344 TNRC6AQ8NDV7 1962 aaKnown RBP8.69□□□□□ -1.02
HMGN1-201ENST00000288344 COL12A1Q99715 3063 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 NUP210LQ5VU65 1888 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 A0A087X1B8 175 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 C4orf51C9J302 202 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 TXNDC9O14530 226 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 SOCS6O14544 535 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 KATNA1O75449 491 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 PDGFAP04085 211 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 PRB1P04280 392 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 CD63P08962 238 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 FAM87AP0C7U9 286 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 C1GALT1C1LP0DN25 315 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 PRKAR1AP10644 381 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 COL6A2P12110 1019 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 AGXTP21549 392 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 ALAS2P22557 587 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 CNTFP26441 200 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 AGTR2P50052 363 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 SERPINB9P50453 376 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 CCR8P51685 355 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 MEF2AQ02078 507 aaPredicted RBP8.69□□□□□ -1.02
HMGN1-201ENST00000288344 PWP1Q13610 501 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 LY6DQ14210 128 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 PCBP2Q15366 365 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMGN1-201ENST00000288344 TBCCQ15814 346 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 MUM1Q2TAK8 710 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 DEFB109BQ30KR1 87 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 FBXO48Q5FWF7 155 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 TECRLQ5HYJ1 363 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 WDR93Q6P2C0 686 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 BORAQ6PGQ7 559 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 KIRREL2Q6UWL6 708 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 TDRPQ86YL5 185 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 GSPT2Q8IYD1 628 aaKnown RBP8.69□□□□□ -1.02
HMGN1-201ENST00000288344 TCAIMQ8N3R3 496 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 UHMK1Q8TAS1 419 aaKnown RBP8.69□□□□□ -1.02
HMGN1-201ENST00000288344 APOBEC4Q8WW27 367 aaKnown RBP8.69□□□□□ -1.02
HMGN1-201ENST00000288344 ADNPQ9H2P0 1102 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 RHBGQ9H310 441 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 ALG9Q9H6U8 611 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 ZNF304Q9HCX3 659 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 CTSFQ9UBX1 484 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 ZFP69BQ9UJL9 534 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 CLDN16Q9Y5I7 305 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 HS3ST3B1Q9Y662 390 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 KCNE2Q9Y6J6 123 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 NBASA2RRP1 2371 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 FLNCQ14315 2725 aa8.69□□□□□ -1.02
HMGN1-201ENST00000288344 LOC102723996A0A087X1L8 192 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 TRIM49D1C9J1S8 452 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 H0YIG0 161 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 UBXN8O00124 270 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 STK16O75716 305 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 IPO13O94829 963 aaKnown RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 BMP10O95393 424 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 NSA2O95478 260 aaKnown RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 SHBGP04278 402 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 EIF2S1P05198 315 aaKnown RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 SNRPAP09012 282 aaKnown RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 ZGLP1P0C6A0 271 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 GNAZP19086 355 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 MMP11P24347 488 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 TYK2P29597 1187 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 GPC1P35052 558 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 MSH2P43246 934 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 HSPA7P48741 367 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 SLC12A2P55011 1212 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 POLE2P56282 527 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 VSNL1P62760 191 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 SETDB1Q15047 1291 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 VWA2Q5GFL6 755 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 THEMIS2Q5TEJ8 643 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 MLIPQ5VWP3 458 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 ADNP2Q6IQ32 1131 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 METTL2BQ6P1Q9 378 aaKnown RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 TMEM205Q6UW68 189 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 ASPGQ86U10 573 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 AMER2Q8N7J2 671 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 STT3BQ8TCJ2 826 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 UTP15Q8TED0 518 aaKnown RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 AENQ8WTP8 325 aaKnown RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 SLC13A3Q8WWT9 602 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 MRRFQ96E11 262 aaKnown RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 SEC16BQ96JE7 1060 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 C17orf62Q9BQA9 187 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 C1QTNF3Q9BXJ4 246 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 RBCK1Q9BYM8 510 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 PITHD1Q9GZP4 211 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 KLHL31Q9H511 634 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 ZBTB26Q9HCK0 441 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 NUDT4Q9NZJ9 180 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 IFT80Q9P2H3 777 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-201ENST00000288344 TLK1Q9UKI8 766 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 ZNF232Q9UNY5 417 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 POLHQ9Y253 713 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms