RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 TSFMP43897 325 aaKnown RBP12.84□□□□□ -0.35
SMARCA5-201ENST00000283131 SLC13A3Q8WWT9 602 aa12.84□□□□□ -0.35
SMARCA5-201ENST00000283131 EIF2B4Q9UI10 523 aaKnown RBP12.84□□□□□ -0.35
SMARCA5-201ENST00000283131 PTPN2P17706 415 aa12.83□□□□□ -0.35
SMARCA5-201ENST00000283131 PDGFRLQ15198 375 aa12.83□□□□□ -0.35
SMARCA5-201ENST00000283131 PIGGQ5H8A4 983 aa12.83□□□□□ -0.35
SMARCA5-201ENST00000283131 EPS8L1Q8TE68 723 aa12.83□□□□□ -0.35
SMARCA5-201ENST00000283131 SLC30A2Q9BRI3 323 aa12.83□□□□□ -0.35
SMARCA5-201ENST00000283131 NANSQ9NR45 359 aa12.83□□□□□ -0.35
SMARCA5-201ENST00000283131 CNTNAP1P78357 1384 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 CEMIPQ8WUJ3 1361 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 TULP2O00295 520 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 OR4F21O95013 312 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 CH25HO95992 272 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 LIN52Q52LA3 116 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 TRIM46Q7Z4K8 759 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 LRRC52Q8N7C0 313 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 MSI1O43347 362 aaKnown RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 MT-ND2P03891 347 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PTGER3P43115 390 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PRKXP51817 358 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PPIGQ13427 754 aaKnown RBP eCLIP12.83□□□□□ -0.363e-6■□□□□ 10.9
SMARCA5-201ENST00000283131 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PDSS2Q86YH6 399 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 LGI4Q8N135 537 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 WDR26Q9H7D7 661 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 TPT1P8Q9HAU6 139 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 RABL2AQ9UBK7 228 aaPredicted RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 RABL2BQ9UNT1 228 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 CASC3O15234 703 aaKnown RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 H6PDO95479 791 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 TNFRSF8P28908 595 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 CX3CR1P49238 355 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 TAS2R39P59534 338 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PPA1Q15181 289 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 NPTX1Q15818 432 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 GKN2Q86XP6 184 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 FBRSQ9HAH7 460 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 B3GNT2Q9NY97 397 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 UTS2RQ9UKP6 389 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 B4GALT2O60909 372 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 UGT1A4P22310 534 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 AGTR1P30556 359 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 RPS3AP61247 264 aaKnown RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 ARL16Q0P5N6 197 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 TRABD2AQ86V40 505 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PTTG2Q9NZH5 202 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 MYH6P13533 1939 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 CNTRLQ7Z7A1 2325 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 GJB1P08034 283 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 RHOP08100 348 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PRPS1L1P21108 318 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PRPH2P23942 346 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 MTPNP58546 118 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PCBP2Q15366 365 aaKnown RBP eCLIP12.83□□□□□ -0.363e-6■■■□□ 17.1
SMARCA5-201ENST00000283131 TSTQ16762 297 aaKnown RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 ZNF674Q2M3X9 581 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 PRAMEF19Q5SWL8 479 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 KCTD18Q6PI47 426 aaPredicted RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 OR13C3Q8NGS6 347 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 TGM7Q96PF1 710 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 ACO2Q99798 780 aaKnown RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 NAA11Q9BSU3 229 aaPredicted RBP12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 CYP8B1Q9UNU6 501 aa12.83□□□□□ -0.36
SMARCA5-201ENST00000283131 GGT3PA6NGU5 568 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 ZNF254O75437 659 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 PLATP00750 562 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 FRKP42685 505 aaPredicted RBP12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 ARL13AQ5H913 290 aaPredicted RBP12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 USP51Q70EK9 711 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 LRRN4Q8WUT4 740 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 SAT2Q96F10 170 aaPredicted RBP12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 BEX2Q9BXY8 128 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 POTEKPQ9BYX7 375 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 DHX33Q9H6R0 707 aaKnown RBP12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 BEX1Q9HBH7 125 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 ITM2CQ9NQX7 267 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 BIN3Q9NQY0 253 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 FAM86C1Q9NVL1 165 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 DHDHQ9UQ10 334 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 TSTD3H0UI37 97 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 DLGAP1O14490 977 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 TGFB1P01137 390 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 RPS3P23396 243 aaKnown RBP eCLIP12.82□□□□□ -0.364e-8■■■□□ 16.9
SMARCA5-201ENST00000283131 TRAM1Q15629 374 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 CREB3L2Q70SY1 520 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 LDB1Q86U70 411 aaPredicted RBP12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 IL22RA1Q8N6P7 574 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 C7orf57Q8NEG2 295 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 PGAM5Q96HS1 289 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 LENG8Q96PV6 779 aaPredicted RBP12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 PKP4Q99569 1192 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 SYT3Q9BQG1 590 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 ITPAQ9BY32 194 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 SEMA6CQ9H3T2 930 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 KCNQ5Q9NR82 932 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 A0A0G2JN53 185 aa12.82□□□□□ -0.36
SMARCA5-201ENST00000283131 YDJCA8MPS7 323 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms