RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ABATP80404 500 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 MAB21L1Q13394 359 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 LGALSLQ3ZCW2 172 aaPredicted RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 SPATS1Q496A3 300 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 PYDC2Q56P42 97 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 KIAA1614Q5VZ46 1190 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 PLET1Q6UQ28 207 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 MILR1Q7Z6M3 343 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 TSPYL5Q86VY4 417 aaPredicted RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 SLC22A9Q8IVM8 553 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 OR11H7Q8NGC8 314 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 PAAF1Q9BRP4 392 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 BCL2L14Q9BZR8 327 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 BRINP2Q9C0B6 783 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 CCNB1IP1Q9NPC3 277 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 MARCH4Q9P2E8 410 aaPredicted RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 HECAQ9UBI9 543 aaPredicted RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 A0A075B6Q4 140 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 F8W810 466 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 DUSP11O75319 330 aaKnown RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 CBX7O95931 251 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 CKMT1AP12532 417 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 PCSK2P16519 638 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 PBX3P40426 434 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 VEGFBP49765 207 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 VLDLRP98155 873 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 POU4F1Q01851 419 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 SOX4Q06945 474 aaPredicted RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 CDH17Q12864 832 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 NPRL3Q12980 569 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 SLC14A1Q13336 389 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 PTGR1Q14914 329 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 PKDCCQ504Y2 493 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 RETSATQ6NUM9 610 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 XKRXQ6PP77 449 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 Q6ZSR9 355 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 ZNF605Q86T29 641 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 SLC35F5Q8WV83 523 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 PHF21AQ96BD5 680 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 SGTBQ96EQ0 304 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 SORCS2Q96PQ0 1159 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 CACNG2Q9Y698 323 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 CFAP20Q9Y6A4 193 aaKnown RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 SMIM28A0A1B0GU29 152 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 A0A1W2PQL4 384 aaPredicted RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 FAM234BA2RU67 622 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 POM121CA8CG34 1229 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 H0YC42 278 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 ZNF682O95780 498 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 TPOP07202 933 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 CD72P21854 359 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 BLVRAP53004 296 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 CRYZQ08257 329 aaKnown RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 WSCD2Q2TBF2 565 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 C6orf136Q5SQH8 315 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 CACHD1Q5VU97 1274 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 SNX20Q7Z614 316 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 DNAJC5GQ8N7S2 189 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 POF1BQ8WVV4 589 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 UFD1Q92890 307 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 ADAM2Q99965 735 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 KRT84Q9NSB2 600 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 SRRDQ9UH36 339 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 A0A0C4DFX4 3053 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 A0A0A6YYJ9 748 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 ELOVL7A1L3X0 281 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 FABP12A6NFH5 140 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 FAM74A7A6NL05 159 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 CLCA1A8K7I4 914 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 ERI2A8K979 691 aaKnown RBP8.46□□□□□ -1.05
VAPB-201ENST00000265619 HNRNPCL2B2RXH8 293 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 SEPT4O43236 478 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 B3GAT3O94766 335 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 WISP3O95389 354 aaPredicted RBP8.46□□□□□ -1.05
VAPB-201ENST00000265619 F9P00740 461 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 INHAP05111 366 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 CNPP09543 421 aaKnown RBP8.46□□□□□ -1.05
VAPB-201ENST00000265619 POU3F2P20265 443 aaPredicted RBP8.46□□□□□ -1.05
VAPB-201ENST00000265619 ARHGDIBP52566 201 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 FAM189BP81408 668 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 YWHAHQ04917 246 aaPredicted RBP8.46□□□□□ -1.05
VAPB-201ENST00000265619 DSC1Q08554 894 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 LTB4RQ15722 352 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 IQCCQ4KMZ1 466 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 FAM74A3Q4VXF1 159 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 DEFB128Q7Z7B8 93 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 PM20D2Q8IYS1 436 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 DPP10Q8N608 796 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 GDPD1Q8N9F7 314 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 ATG16L2Q8NAA4 619 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 FOXJ1Q92949 421 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 DIRAS2Q96HU8 199 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 HYLS1Q96M11 299 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 MGLLQ99685 303 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 FICDQ9BVA6 458 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 ZNF416Q9BWM5 594 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 CD244Q9BZW8 370 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 C3orf14Q9HBI5 128 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 ZNF226Q9NYT6 803 aa8.46□□□□□ -1.05
VAPB-201ENST00000265619 CMAHPQ9Y471 501 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms