RNA–Protein interactions for RNA: ENST00000262803.9

UPF1-201, Transcript of UPF1, RNA helicase and ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF1, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-201ENST00000262803 ERI1Q8IV48 349 aaKnown RBP18.55■□□□□ 0.56
UPF1-201ENST00000262803 C1orf52Q8N6N3 182 aaKnown RBP18.55■□□□□ 0.56
UPF1-201ENST00000262803 POLR2J2Q9GZM3 115 aaKnown RBP18.55■□□□□ 0.56
UPF1-201ENST00000262803 C8orf33Q9H7E9 229 aaPredicted RBP18.55■□□□□ 0.56
UPF1-201ENST00000262803 TXNRD2Q9NNW7 524 aa18.55■□□□□ 0.56
UPF1-201ENST00000262803 NFKBIEO00221 500 aa18.55■□□□□ 0.56
UPF1-201ENST00000262803 ENGP17813 658 aa18.55■□□□□ 0.56
UPF1-201ENST00000262803 DSC3Q14574 896 aa18.55■□□□□ 0.56
UPF1-201ENST00000262803 GANABQ14697 944 aaKnown RBP18.55■□□□□ 0.56
UPF1-201ENST00000262803 KLHDC10Q6PID8 442 aa18.55■□□□□ 0.56
UPF1-201ENST00000262803 KIAA1191Q96A73 305 aa18.55■□□□□ 0.56
UPF1-201ENST00000262803 ADAD1Q96M93 576 aaKnown RBP18.55■□□□□ 0.56
UPF1-201ENST00000262803 PADI2Q9Y2J8 665 aa18.55■□□□□ 0.56
UPF1-201ENST00000262803 ZNF451Q9Y4E5 1061 aa18.55■□□□□ 0.56
UPF1-201ENST00000262803 GMEB1Q9Y692 573 aa18.55■□□□□ 0.56
UPF1-201ENST00000262803 TBX1O43435 398 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 FARS2O95363 451 aaKnown RBP18.54■□□□□ 0.56
UPF1-201ENST00000262803 UFM1P61960 85 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 PPP1R8Q12972 351 aaKnown RBP18.54■□□□□ 0.56
UPF1-201ENST00000262803 ARFRP1Q13795 201 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 OR4F3Q6IEY1 312 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 KCNJ9Q92806 393 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 FKBP10Q96AY3 582 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 CMKLR1Q99788 373 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 MVB12BQ9H7P6 319 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 ASB6Q9NWX5 421 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 FABP12A6NFH5 140 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 RFPL1O75677 317 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 HSD3B1P14060 373 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 HSD3B2P26439 372 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 CDK6Q00534 326 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 TEAD2Q15562 447 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 GXYLT1Q4G148 440 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 RPL13AP3Q6NVV1 102 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 Q6ZVU0 165 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 RPS27LQ71UM5 84 aaKnown RBP18.54■□□□□ 0.56
UPF1-201ENST00000262803 CLIP4Q8N3C7 705 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 UCK2Q9BZX2 261 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 A0A1W2PP18 115 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 BCAS2O75934 225 aaPredicted RBP18.54■□□□□ 0.56
UPF1-201ENST00000262803 GGT5P36269 586 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 TIGD6Q17RP2 521 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 OR4F6Q8NGB9 312 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 LDAHQ9H6V9 325 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 SNTG1Q9NSN8 517 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 MYH2Q9UKX2 1941 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 MTX2O75431 263 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 STC1P52823 247 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 CILP2Q8IUL8 1156 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 GTPBP2Q9BX10 602 aaKnown RBP18.54■□□□□ 0.56
UPF1-201ENST00000262803 WDR6Q9NNW5 1121 aaKnown RBP18.54■□□□□ 0.56
UPF1-201ENST00000262803 AKAP12Q02952 1782 aa18.54■□□□□ 0.56
UPF1-201ENST00000262803 NRIP1P48552 1158 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 TXNDC8Q6A555 127 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 TAS1R3Q7RTX0 852 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 TRAM1L1Q8N609 369 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 OR2M4Q96R27 311 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 CD180Q99467 661 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 P2RY13Q9BPV8 354 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 TMPRSS11EQ9UL52 423 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 TRBC2A0A5B9 178 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 SCAMP1O15126 338 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 GPR68Q15743 365 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 OR2T5Q6IEZ7 315 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 AGTRAPQ6RW13 159 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 MSANTD1Q6ZTZ1 278 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 IQCHQ86VS3 1027 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 ZNF227Q86WZ6 799 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 PLD6Q8N2A8 252 aaKnown RBP18.53■□□□□ 0.56
UPF1-201ENST00000262803 OR2T29Q8NH02 315 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 SEC14L1Q92503 715 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 TAMM41Q96BW9 452 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 GIN1Q9NXP7 522 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 TGFB1P01137 390 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 JMJD7P0C870 316 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 FGF3P11487 239 aaPredicted RBP18.53■□□□□ 0.56
UPF1-201ENST00000262803 EMX2Q04743 252 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 NFATC2Q13469 925 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 IDNKQ5T6J7 187 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 LRRC66Q68CR7 880 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 ERMP1Q7Z2K6 904 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 PDSS2Q86YH6 399 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 ARHGAP9Q9BRR9 750 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 TIGARQ9NQ88 270 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 SLC22A14Q9Y267 594 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 AK1P00568 194 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 KLK1P06870 262 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 HEXBP07686 556 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 GLP1RP43220 463 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 SLC6A9P48067 706 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 DNAJB13P59910 316 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 LIPJQ5W064 366 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 NRROSQ86YC3 692 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 GRPEL2Q8TAA5 225 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 H3BSA7 217 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 AOC2O75106 756 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 CLPXO76031 633 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 FPR1P21462 350 aa18.53■□□□□ 0.56
UPF1-201ENST00000262803 PLP2Q04941 152 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms