RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 A0A087WXM4 84 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 C1orf226A1L170 272 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 CCDC160A6NGH7 325 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 ENO4A6NNW6 628 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 E2F6O75461 281 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 BMP10O95393 424 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 PAK4O96013 591 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 CXCR2P25025 360 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 TRIM23P36406 574 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 SOX9P48436 509 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 CLCNKAP51800 687 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 IST1P53990 364 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 C2orf80Q0P641 193 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 VEZF1Q14119 521 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 ZIK1Q3SY52 487 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 C2orf27AQ580R0 203 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 FAM129CQ86XR2 697 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 PTOV1Q86YD1 416 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 OFCC1Q8IZS5 231 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 RAB42Q8N4Z0 105 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 ZNF740Q8NDX6 193 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 WDR48Q8TAF3 677 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.42□□□□□ -0.427e-9■■■□□ 18.8
SPTLC1-201ENST00000262554 C16orf78Q8WTQ4 265 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 PPCDCQ96CD2 204 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 RPP25Q9BUL9 199 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 ACAT2Q9BWD1 397 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 OSBPL10Q9BXB5 764 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 YTHDF1Q9BYJ9 559 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 USE1Q9NZ43 259 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 AHSPQ9NZD4 102 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 THEGQ9P2T0 379 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 TAC3Q9UHF0 121 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 FZD4Q9ULV1 537 aa12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 ZFR2Q9UPR6 939 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 EXO1Q9UQ84 846 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 MAGED1Q9Y5V3 778 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1-201ENST00000262554 K7EQS6 105 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 C1QCP02747 245 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 GBAP04062 536 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 KLK1P06870 262 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 FURINP09958 794 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 RPL10P27635 214 aaKnown RBP12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 KDELR2P33947 212 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 MAGEA2P43356 314 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 KIR2DL1P43626 348 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 SH3BGRP55822 239 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 BIRC2Q13490 618 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 SPIDRQ14159 915 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 ZNF385BQ569K4 471 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 SDE2Q6IQ49 451 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 SLC30A9Q6PML9 568 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 SPESP1Q6UW49 350 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 CHST15Q7LFX5 561 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 HIPK1Q86Z02 1210 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 SYNPOQ8N3V7 929 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 ZFP90Q8TF47 636 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 SMPDL3AQ92484 453 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 MTERF3Q96E29 417 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 AIF1LQ9BQI0 150 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 TRIM4Q9C037 500 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 SOX17Q9H6I2 414 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 FBXL12Q9NXK8 326 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 IFT80Q9P2H3 777 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 SPASTQ9UBP0 616 aa12.41□□□□□ -0.42
SPTLC1-201ENST00000262554 LAMA3Q16787 3333 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 PRR23AA6NEV1 266 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 ANKDD1BA6NHY2 528 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 VILLO15195 856 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 ABCB1P08183 1280 aaPredicted RBP12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 ACP5P13686 325 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 DCTP40126 519 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 ALDH3B2P48448 385 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 CCR8P51685 355 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 CDH15P55291 814 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 TAS2R50P59544 299 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 PPP2R2BQ00005 443 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 DMPKQ09013 629 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 PDE7AQ13946 482 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 FGL2Q14314 439 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 RGNQ15493 299 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 TTC23Q5W5X9 447 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 FAM71E1Q6IPT2 247 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 KIAA1161Q6NSJ0 714 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 IKBIPQ70UQ0 350 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 LPCAT2Q7L5N7 544 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 GALNT15Q8N3T1 639 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 ZNF555Q8NEP9 628 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 PJA1Q8NG27 643 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 OR10Q1Q8NGQ4 319 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 GOT1L1Q8NHS2 421 aaPredicted RBP12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 ZFP28Q8NHY6 868 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 KLK6Q92876 244 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 DPH2Q9BQC3 489 aaPredicted RBP12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 C1QTNF7Q9BXJ2 289 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 C1QTNF2Q9BXJ5 285 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 ASPSCR1Q9BZE9 553 aa12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 RBM38Q9H0Z9 239 aaKnown RBP12.4□□□□□ -0.42
SPTLC1-201ENST00000262554 CHST8Q9H2A9 424 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms