RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 CLDN9O95484 217 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 ONECUT2O95948 504 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 OTCP00480 354 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 SBK3P0C264 359 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 ITGAXP20702 1163 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 ZNF10P21506 573 aaPredicted RBP17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 PRKAA2P54646 552 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 TGM3Q08188 693 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 E2F2Q14209 437 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 RBBP7Q16576 425 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 TMEM214Q6NUQ4 689 aaKnown RBP17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 OVCH1Q7RTY7 1134 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 ENDOVQ8N8Q3 282 aaKnown RBP17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 ANKRD53Q8N9V6 530 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 FAR2Q96K12 515 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 C10orf90Q96M02 699 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 SCN2AQ99250 2005 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 YIPF2Q9BWQ6 316 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 SPNS1Q9H2V7 528 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 ACTL8Q9H568 366 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 NOL11Q9H8H0 719 aaKnown RBP17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 WDR54Q9H977 334 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 AKIRIN1Q9H9L7 192 aaPredicted RBP17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 CPNE5Q9HCH3 593 aa17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 ZNF282Q9UDV7 671 aaPredicted RBP17.83■□□□□ 0.44
CYSTM1-201ENST00000261811 PLIN3O60664 434 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 NSA2O95478 260 aaKnown RBP17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 STATHP02808 62 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 PROCP04070 461 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 RPS17P08708 135 aaKnown RBP17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 ATXN8OSP0DMR3 200 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 PCNAP12004 261 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 CPA3P15088 417 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 EPORP19235 508 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 FOLR3P41439 243 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 OR1D4P47884 311 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 CYP4F2P78329 520 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 DSG2Q14126 1118 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 C10orf62Q5T681 223 aaPredicted RBP17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 FAM198BQ6UWH4 519 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 ZYG11AQ6WRX3 759 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 GPR155Q7Z3F1 870 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 BANPQ8N9N5 519 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 KCT2Q8NC54 265 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 SRFBP1Q8NEF9 429 aaKnown RBP17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 ZCCHC10Q8TBK6 192 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 PGM2Q96G03 612 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 PKNOX2Q96KN3 472 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 CATSPER2Q96P56 530 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 CENPKQ9BS16 269 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 NTMT1Q9BV86 223 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 RHBGQ9H310 441 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 SEMA4BQ9NPR2 832 aaPredicted RBP17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 IL17BQ9UHF5 180 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 TCFL5Q9UL49 500 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 PLLPQ9Y342 182 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 MAU2Q9Y6X3 613 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 NUP210LQ5VU65 1888 aa17.82■□□□□ 0.44
CYSTM1-201ENST00000261811 EPG5Q9HCE0 2579 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 A0A0A6YYC8 382 aaPredicted RBP17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 LRRC14BA6NHZ5 514 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 I3L1I5 382 aaPredicted RBP17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 TERTO14746 1132 aaKnown RBP17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 MLYCDO95822 493 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 ALOX12P18054 663 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 SLC9A5Q14940 896 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 CFAP157Q5JU67 520 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 ZNF678Q5SXM1 525 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 TTC19Q6DKK2 380 aaPredicted RBP17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 C19orf48Q6RUI8 117 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 CHSY3Q70JA7 882 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 MILR1Q7Z6M3 343 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 LAS2Q8IYD9 372 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 METTL27Q8N6F8 245 aaPredicted RBP17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 ZNF483Q8TF39 744 aaPredicted RBP17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 SNRNP27Q8WVK2 155 aaKnown RBP17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 L3HYPDHQ96EM0 354 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 VPS50Q96JG6 964 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 MACROD1Q9BQ69 325 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 SLC6A16Q9GZN6 736 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 SLC26A1Q9H2B4 701 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 SYNPO2LQ9H987 977 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 CLK4Q9HAZ1 481 aaKnown RBP17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 MKKSQ9NPJ1 570 aaPredicted RBP17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 EMCNQ9ULC0 261 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 MAP4K5Q9Y4K4 846 aa17.81■□□□□ 0.44
CYSTM1-201ENST00000261811 CACNA1BQ00975 2339 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 H0YIV9 168 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 H3BQF6 201 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 F8A1P23610 371 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 PIK3CBP42338 1070 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 CLCQ05315 142 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 SRSF6Q13247 344 aaKnown RBP17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 CASP8Q14790 479 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 COL28A1Q2UY09 1125 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 TOR1AIP1Q5JTV8 583 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 LCN10Q6JVE6 187 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 MRPL14Q6P1L8 145 aaKnown RBP17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 TRIM40Q6P9F5 258 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms