RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 OR52E1Q8NGJ3 308 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ADAMTS17Q8TE56 1095 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 RSRC1Q96IZ7 334 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 PPIL3Q9H2H8 161 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ZFP14Q9HCL3 533 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 OLAHQ9NV23 265 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 PSMD13Q9UNM6 376 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 POMPQ9Y244 141 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 C17orf113A0A1B0GUU1 675 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 KANSL1LA0AUZ9 987 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 GSTA2P09210 222 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 FUT1P19526 365 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 TBXA2RP21731 343 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 PSMA4P25789 261 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 NTSR1P30989 418 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 MED21Q13503 144 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ZSCAN26Q16670 478 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 XKR6Q5GH73 641 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 Q6ZPB1 254 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 EFL1Q7Z2Z2 1120 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 FKBP10Q96AY3 582 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 DHRS1Q96LJ7 313 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 BTBD10Q9BSF8 475 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 APOOQ9BUR5 198 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 BHLHE41Q9C0J9 482 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 STARD5Q9NSY2 213 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 NCKIPSDQ9NZQ3 722 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ACAD8Q9UKU7 415 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ORC6Q9Y5N6 252 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 SVILO95425 2214 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CASP9P55211 416 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 TDGQ13569 410 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 DMC1Q14565 340 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 TGIF1Q15583 401 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 LTB4RQ15722 352 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 TTC23LQ6PF05 361 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ENPP6Q6UWR7 440 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 LINC00114Q6XXX2 140 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 KYAT3Q6YP21 454 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 THSD4Q6ZMP0 1018 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CCDC149Q6ZUS6 474 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 FAM9CQ8IZT9 166 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 PDIK1LQ8N165 341 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 DPP10Q8N608 796 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 RNF148Q8N7C7 305 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF615Q8N8J6 731 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 HM13Q8TCT9 377 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CRELD1Q96HD1 420 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CENPKQ9BS16 269 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 SEMA6CQ9H3T2 930 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 HACD3Q9P035 362 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ACSL6Q9UKU0 697 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 KCNK6Q9Y257 313 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 A0A1W2PQ72 361 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 MAN2B1O00754 1011 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 STX16O14662 325 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNHIT1O43257 154 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CYBBP04839 570 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 DGKAP23743 735 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 EEF1DP29692 281 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CAPRIN1Q14444 709 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ARHGAP15Q53QZ3 475 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 GTF2IRD2BQ6EKJ0 949 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 GTF2IRD2Q86UP8 949 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ZFAND4Q86XD8 727 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CCDC103Q8IW40 242 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 RAVER1Q8IY67 606 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 OR2L3Q8NG85 312 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 TRPC4APQ8TEL6 797 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 FBXL8Q96CD0 374 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 RIPOR3Q96MK2 946 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 MYOCQ99972 504 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 DNAJC28Q9NX36 388 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 LSM7Q9UK45 103 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 RNF215Q9Y6U7 377 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 SETD2Q9BYW2 2564 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 TET2Q6N021 2002 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 EME2A4GXA9 379 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 E9PBE3 544 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 NPHS1O60500 1241 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 KLHL41O60662 606 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CT45A8P0DMV1 189 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CT45A9P0DMV2 189 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 KITP10721 976 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC2A3P11169 496 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CPA3P15088 417 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 FOLR1P15328 257 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 KPNA1P52294 538 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 MAZP56270 477 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CACNG1Q06432 222 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 SRSF1Q07955 248 aaKnown RBP eCLIP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 SKIDA1Q1XH10 827 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CT45A2Q5DJT8 189 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 TRPM8Q7Z2W7 1104 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 YAF2Q8IY57 180 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 CACTIN-AS1Q8N1I8 211 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 ABCG2Q9UNQ0 655 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 AAR2Q9Y312 384 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 FAM221BA6H8Z2 402 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms