RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SPHK1Q9NYA1 384 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 CA14Q9ULX7 337 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 C5orf58C9J3I9 102 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 TNFAIP8O95379 198 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 C1orf105O95561 183 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 C8GP07360 202 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 GSTM1P09488 218 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 TGFBR1P36897 503 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 MAP2K4P45985 399 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 STT3AP46977 705 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 CREMQ03060 361 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 MLLT1Q03111 559 aaPredicted RBP8.74□□□□□ -1.01
CKAP2-201ENST00000258607 SLC9A5Q14940 896 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 MAPK11Q15759 364 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 LEXMQ3ZCV2 418 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 MPP7Q5T2T1 576 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 MFSD4BQ5TF39 518 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 SDE2Q6IQ49 451 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 TP53INP1Q96A56 240 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 ECHDC3Q96DC8 303 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 HSH2DQ96JZ2 352 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 NUSAP1Q9BXS6 441 aaKnown RBP8.74□□□□□ -1.01
CKAP2-201ENST00000258607 TMEM168Q9H0V1 697 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 TCEAL2Q9H3H9 227 aaPredicted RBP8.74□□□□□ -1.01
CKAP2-201ENST00000258607 FGF22Q9HCT0 170 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 SELENONQ9NZV5 590 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 SLCO1B1Q9Y6L6 691 aa8.74□□□□□ -1.01
CKAP2-201ENST00000258607 EDDM13A0A1B0GTR0 161 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 A0A1W2PPW3 197 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 LCMT2O60294 686 aaKnown RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 NPPBP16860 134 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 AMD1P17707 334 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 ZFP36L2P47974 494 aaKnown RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 CDK3Q00526 305 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 SPIBQ01892 262 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 ABHD18Q0P651 414 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 MTA1Q13330 715 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 DMC1Q14565 340 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 KCTD21Q4G0X4 260 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 PRSS36Q5K4E3 855 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 AHSA2Q719I0 299 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 BCDIN3DQ7Z5W3 292 aaKnown RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 TRAM1L1Q8N609 369 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 SIMC1Q8NDZ2 872 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 OR9Q2Q8NGE9 314 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 NACC2Q96BF6 587 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 MCCC1Q96RQ3 725 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 KLHL31Q9H511 634 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 OCEL1Q9H607 264 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 FANCEQ9HB96 536 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 CCM2LQ9NUG4 571 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 SMPD3Q9NY59 655 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 STOML2Q9UJZ1 356 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 ORC6Q9Y5N6 252 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 PIAS3Q9Y6X2 628 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 POLEQ07864 2286 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 H3BN98 237 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 VPS4BO75351 444 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 IGFBP1P08833 259 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 IL1RNP18510 177 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 BUD31P41223 144 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 LSM11P83369 360 aaKnown RBP eCLIP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 ALDH6A1Q02252 535 aaKnown RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 FGL2Q14314 439 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 LRRC32Q14392 662 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 LASP1Q14847 261 aaKnown RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 UBXN2BQ14CS0 331 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 DEFB134Q4QY38 66 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 RUNDC3AQ59EK9 446 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 SYCE2Q6PIF2 218 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 ZNF438Q7Z4V0 828 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 RBM45Q8IUH3 476 aaKnown RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 MINDY1Q8N5J2 469 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 OR9A1PQ8NGU1 263 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 HHIPQ96QV1 700 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 DPH7Q9BTV6 452 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 ASPSCR1Q9BZE9 553 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 PDP2Q9P2J9 529 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 FRMPD3Q5JV73 1810 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 NPIPA5A0A0B4J1W7 369 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 LOC100506127A0A0U1RQW1 187 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 B4DGG1 531 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 NPIPA7E9PJI5 369 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 J3QRK9 145 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 CELA2BP08218 269 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 CISD3P0C7P0 127 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 NPIPA8P0DM63 369 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 RRM2P31350 389 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 RYKP34925 604 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 DRD3P35462 400 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 PNLIPRP1P54315 467 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 PPP1CAP62136 330 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 SLC5A12Q1EHB4 618 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 CHRDL2Q6WN34 429 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 LRRTM4Q86VH4 590 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 GALNT13Q8IUC8 556 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 P3H2Q8IVL5 708 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 PIK3C3Q8NEB9 887 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 VPS37AQ8NEZ2 397 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 SLC5A11Q8WWX8 675 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms