RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TIMP2P16035 220 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 EPHA4P54764 986 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 CBX3Q13185 183 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 ARMCX4Q5H9R4 360 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 KCTD11Q693B1 232 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 GOLGA7Q7Z5G4 137 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 ARL10Q8N8L6 244 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 OR14A16Q8NHC5 309 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 SLC39A13Q96H72 371 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 MRGPRX2Q96LB1 330 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 LENG8Q96PV6 779 aaPredicted RBP12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 TBC1D23Q9NUY8 699 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 LAMB1P07942 1786 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 GPR143P51810 404 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 RBBP4Q09028 425 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 NDUFAF6Q330K2 333 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 PTCHD3Q3KNS1 767 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 LIPIQ6XZB0 460 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 PARS2Q7L3T8 475 aaKnown RBP12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 FAM86B1Q8N7N1 296 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 DTWD2Q8NBA8 298 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 DDIT4LQ96D03 193 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 REEP4Q9H6H4 257 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 PIGBOS1A0A0B4J2F0 54 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 EFCAB10A6NFE3 127 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 TPST1O60507 370 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 C1SP09871 688 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 DCTN2Q13561 401 aaKnown RBP12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 OASLQ15646 514 aaKnown RBP12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 CTC1Q2NKJ3 1217 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 CXXC1Q9P0U4 656 aaPredicted RBP12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 TAAR2Q9P1P5 351 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 UPB1Q9UBR1 384 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 GHRLQ9UBU3 117 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 CYTH4Q9UIA0 394 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 SLC22A14Q9Y267 594 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 MMACHCQ9Y4U1 282 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 OR5K3A6NET4 321 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 NPIPA2E9PIF3 369 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 NPIPA3F8WFD2 350 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 KRT36O76013 467 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 FDXRP22570 491 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 CHRNA4P43681 627 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 ADAM17P78536 824 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 MAPK11Q15759 364 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 ZCCHC23Q6ZST2 131 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 VASH1Q7L8A9 365 aaPredicted RBP12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 MISPQ8IVT2 679 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 GEMIN6Q8WXD5 167 aaKnown RBP12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 PRR11Q96HE9 360 aaPredicted RBP12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 SLC12A9Q9BXP2 914 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 ACTRT3Q9BYD9 372 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 MAP4K5Q9Y4K4 846 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 H0YC42 278 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 GATBO75879 557 aaKnown RBP12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 BEST1O76090 585 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 ST3GAL3Q11203 375 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 C14orf28Q4W4Y0 310 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 C3P1Q6ZMU1 363 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 FTMTQ8N4E7 242 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 ST13P5Q8NFI4 369 aaPredicted RBP12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 RORBQ92753 470 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 BRF2Q9HAW0 419 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 PISDQ9UG56 409 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 MCTS1Q9ULC4 181 aaKnown RBP12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 MAN2B2Q9Y2E5 1009 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 GMPPBQ9Y5P6 360 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 CST1P01037 141 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 EGFP01133 1207 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 PTHP01270 115 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 CD82P27701 267 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 CCR10P46092 362 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 CDH13P55290 713 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 CDKL1Q00532 357 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 EMX2Q04743 252 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 FADDQ13158 208 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 OR4C11Q6IEV9 310 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 NLRP8Q86W28 1048 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF100Q8IYN0 542 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF786Q8N393 782 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 DPH7Q9BTV6 452 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 WASH6PQ9NQA3 447 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 RASSF1Q9NS23 344 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 OXSMQ9NWU1 459 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 POFUT2Q9Y2G5 429 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 TRBC2A0A5B9 178 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 TLCD2A6NGC4 264 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 PLK4O00444 970 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 FNTBP49356 437 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 CASP9P55211 416 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 DEFB133Q30KQ1 61 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 LRIT3Q3SXY7 679 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 SNX33Q8WV41 574 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 RTP4Q96DX8 246 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 BHLHE41Q9C0J9 482 aaPredicted RBP12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 OR8D2Q9GZM6 311 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms