RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 EBPLQ9BY08 206 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 RBCK1Q9BYM8 510 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 SOX17Q9H6I2 414 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 WASH6PQ9NQA3 447 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 TMEM45AQ9NWC5 275 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF878C9JN71 531 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 PROM1O43490 865 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 CD48P09326 243 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 SMIM10L2AP0DMW4 78 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 SMIM10L2BP0DMW5 78 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 IRF9Q00978 393 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 MC2RQ01718 297 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF616Q08AN1 781 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 SPHARQ15513 63 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 RAVER1Q8IY67 606 aaKnown RBP12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 CNOT9Q92600 299 aaKnown RBP12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 TMEM74Q96NL1 305 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 ACO2Q99798 780 aaKnown RBP12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZDHHC6Q9H6R6 413 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 DNAJC27Q9NZQ0 273 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 NOCTQ9UK39 431 aaKnown RBP12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 TRBC2A0A5B9 178 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 GLTPD2A6NH11 291 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 ARL5CA6NH57 179 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 J3QLW9 94 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 LYPLA2O95372 231 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF19P17023 458 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 WEE1P30291 646 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 RFC2P35250 354 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 TBC1D25Q3MII6 688 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 EIPR1Q53HC9 387 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 LIPKQ5VXJ0 399 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 GTF2IRD2BQ6EKJ0 949 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 ABHD15Q6UXT9 468 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 GTF2IRD2Q86UP8 949 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 MTMR14Q8NCE2 650 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 SHKBP1Q8TBC3 707 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 GTF2H4Q92759 462 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 CLIP3Q96DZ5 547 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZBED6CLQ96FA7 236 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC35G5Q96KT7 338 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 TM9SF2Q99805 663 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 PTTG3PQ9NZH4 202 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 FZD4Q9ULV1 537 aa12.77□□□□□ -0.36
PCDHGA3-201ENST00000253812 NFKBIEO00221 500 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 ADAMTS3O15072 1205 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 MUSKO15146 869 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 DGKGP49619 791 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 NOGQ13253 232 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 GK2Q14410 553 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 POU4F3Q15319 338 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 CLVS2Q5SYC1 327 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 C3P1Q6ZMU1 363 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 RD3Q7Z3Z2 195 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 SVBPQ8N300 66 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 TCEANCQ8N8B7 351 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 HSH2DQ96JZ2 352 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 C1QTNF7Q9BXJ2 289 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 AAASQ9NRG9 546 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 PTCH2Q9Y6C5 1203 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 MEIOCA2RUB1 952 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 RCBTB2O95199 551 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 IFNA1P01562 189 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 PTPN9P43378 593 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 CEACAM7Q14002 265 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 TRAM1Q15629 374 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 BCL2L15Q5TBC7 163 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 RERGQ96A58 199 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 ALPK1Q96QP1 1244 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 HAPLN3Q96S86 360 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 LHPPQ9H008 270 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 TMEM181Q9P2C4 612 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 KANSL3Q9P2N6 904 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 SLIT2O94813 1529 aa12.77□□□□□ -0.37
PCDHGA3-201ENST00000253812 CXorf49A8MYA2 514 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 LRRTM2O43300 516 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 OAZ2O95190 189 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 PRKCHP24723 683 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 KLRC2P26717 231 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 HTR7P34969 479 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 CACNG1Q06432 222 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 TDGQ13569 410 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 USP41Q3LFD5 358 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 ZDHHC20Q5W0Z9 365 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 KBTBD6Q86V97 674 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 PKP4Q99569 1192 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 CTPS2Q9NRF8 586 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 C19orf12Q9NSK7 152 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 ZFR2Q9UPR6 939 aaKnown RBP12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 CASZ1Q86V15 1759 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 OR6C74A6NCV1 312 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 TMEM233B4DJY2 109 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 ATP6V1G2-DDX39BF2Z307 99 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 CYB5AP00167 134 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 SLC35G4P0C7Q5 338 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 FAM171A1Q5VUB5 890 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
PCDHGA3-201ENST00000253812 DLK2Q6UY11 383 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms