RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 AHSA2Q719I0 299 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 ETFBKMTQ8IXQ9 262 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 KIAA1958Q8N8K9 716 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 RASSF1Q9NS23 344 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 KRT84Q9NSB2 600 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 GDE1Q9NZC3 331 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 GPRC5BQ9NZH0 403 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 PPT2Q9UMR5 302 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 PRSS21Q9Y6M0 314 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 HOXC11O43248 304 aaPredicted RBP16.38■□□□□ 0.21
FOXA1-201ENST00000250448 NFATC1O95644 943 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 KRT6AP02538 564 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 KRT6BP04259 564 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 FABP3P05413 133 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 EFNA1P20827 205 aaPredicted RBP16.38■□□□□ 0.21
FOXA1-201ENST00000250448 MAPK8P45983 427 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 KRT6CP48668 564 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 HNRNPFP52597 415 aaKnown RBP16.38■□□□□ 0.21
FOXA1-201ENST00000250448 CDKN3Q16667 212 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 TTLL9Q3SXZ7 439 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 ZNF362Q5T0B9 420 aaPredicted RBP16.38■□□□□ 0.21
FOXA1-201ENST00000250448 DEPDC1Q5TB30 811 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 METTL3Q86U44 580 aaKnown RBP16.38■□□□□ 0.21
FOXA1-201ENST00000250448 TSPYL5Q86VY4 417 aaPredicted RBP16.38■□□□□ 0.21
FOXA1-201ENST00000250448 LYSMD2Q8IV50 215 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 TSSK3Q96PN8 268 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 SIGLEC11Q96RL6 698 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 ZNF576Q9H609 170 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 CD84Q9UIB8 345 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 ISPDA4D126 451 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 GAPDHSO14556 408 aaPredicted RBP16.37■□□□□ 0.21
FOXA1-201ENST00000250448 SLC25A14O95258 325 aaPredicted RBP16.37■□□□□ 0.21
FOXA1-201ENST00000250448 PRAMEF1O95521 474 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 SEMG1P04279 462 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 SLC13A2Q13183 592 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 UBE2UQ5VVX9 321 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 CHRDL2Q6WN34 429 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 MBOAT1Q6ZNC8 495 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 CYP2U1Q7Z449 544 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 CCDC71Q8IV32 467 aaPredicted RBP16.37■□□□□ 0.21
FOXA1-201ENST00000250448 RBFAQ8N0V3 343 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 ZBTB2Q8N680 514 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 SLC38A4Q969I6 547 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 PITX2Q99697 317 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 BRD9Q9H8M2 597 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 DEC1Q9P2X7 70 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 ERVK-11Q9UQG0 969 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 SAMHD1Q9Y3Z3 626 aaKnown RBP16.37■□□□□ 0.21
FOXA1-201ENST00000250448 F5P12259 2224 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 PEX14O75381 377 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 WBP4O75554 376 aaKnown RBP16.37■□□□□ 0.21
FOXA1-201ENST00000250448 PDYNP01213 254 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 PRPS2P11908 318 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 BPIP17213 487 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 NNMTP40261 264 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 CLK1P49759 484 aaKnown RBP16.37■□□□□ 0.21
FOXA1-201ENST00000250448 VLDLRP98155 873 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 DMC1Q14565 340 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 ATAT1Q5SQI0 421 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 GDPD4Q6W3E5 623 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 ATG16L2Q8NAA4 619 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 ITPAQ9BY32 194 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 IL26Q9NPH9 171 aa16.37■□□□□ 0.21
FOXA1-201ENST00000250448 TCF20Q9UGU0 1960 aaKnown RBP16.37■□□□□ 0.21
FOXA1-201ENST00000250448 RFXANKO14593 260 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 CLDN9O95484 217 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 GSSP48637 474 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 DMPKQ09013 629 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 CPSF6Q16630 551 aaKnown RBP eCLIP16.36■□□□□ 0.21
FOXA1-201ENST00000250448 PROX2Q3B8N5 592 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 ZNF404Q494X3 552 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 COLEC12Q5KU26 742 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 METTL2BQ6P1Q9 378 aaKnown RBP16.36■□□□□ 0.21
FOXA1-201ENST00000250448 MAMSTRQ6ZN01 415 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 GALNT10Q86SR1 603 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 CLDN19Q8N6F1 224 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 BEND7Q8N7W2 519 aaPredicted RBP16.36■□□□□ 0.21
FOXA1-201ENST00000250448 GPR26Q8NDV2 337 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 HTRA1Q92743 480 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 ECHDC3Q96DC8 303 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 CEP44Q9C0F1 390 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 AASDHPPTQ9NRN7 309 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 B4GALT6Q9UBX8 382 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 RPS6KA6Q9UK32 745 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 RBMX2Q9Y388 322 aaKnown RBP16.36■□□□□ 0.21
FOXA1-201ENST00000250448 METTL15A6NJ78 407 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 EVPLLA8MZ36 301 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 STK16O75716 305 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 EIF2S1P05198 315 aaKnown RBP16.36■□□□□ 0.21
FOXA1-201ENST00000250448 TACR1P25103 407 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 SOX9P48436 509 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 ADAM15Q13444 863 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 ZCCHC8Q6NZY4 707 aaKnown RBP16.36■□□□□ 0.21
FOXA1-201ENST00000250448 VTCN1Q7Z7D3 282 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 SERPINA11Q86U17 422 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 NELL1Q92832 810 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 UBE2FQ969M7 185 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 TESCQ96BS2 214 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 TXNDC15Q96J42 360 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 MMP27Q9H306 513 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms