RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-201ENST00000225964 UCKL1Q9NWZ5 548 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 ABCD2Q9UBJ2 740 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 POFUT2Q9Y2G5 429 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 PCDHB14Q9Y5E9 798 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 OAS1P00973 400 aaKnown RBP12.84□□□□□ -0.35
COL1A1-201ENST00000225964 RPS21P63220 83 aaKnown RBP12.84□□□□□ -0.35
COL1A1-201ENST00000225964 OGFRL1Q5TC84 451 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-201ENST00000225964 TRIM74Q86UV6 250 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF283Q8N7M2 679 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 OR4F6Q8NGB9 312 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 DZANK1Q9NVP4 752 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 HPF1Q9NWY4 346 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 A0A0U1RQF3 1178 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 C13orf42A0A1B0GVH6 325 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 MANBAO00462 879 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 VILLO15195 856 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 HAPLN1P10915 354 aaPredicted RBP12.83□□□□□ -0.36
COL1A1-201ENST00000225964 ST3GAL3Q11203 375 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 TMEM5Q9Y2B1 443 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 CIB4A0PJX0 185 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 OR6C74A6NCV1 312 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 GLP1RP43220 463 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 MLLT10P55197 1068 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 GNG2P59768 71 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 FAM86B1Q8N7N1 296 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF516Q92618 1163 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 MEAF6Q9HAF1 191 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 Q9Y3F1 56 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 ANKRD66B4E2M5 251 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 RBM34P42696 430 aaKnown RBP12.83□□□□□ -0.36
COL1A1-201ENST00000225964 TMPPEQ6ZT21 453 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 TMEM151BQ8IW70 566 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 LRRC58Q96CX6 371 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF350Q9GZX5 532 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 PCDHAC1Q9H158 963 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 PDE7BQ9NP56 450 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 ZFR2Q9UPR6 939 aaKnown RBP12.83□□□□□ -0.36
COL1A1-201ENST00000225964 M0R2N6 131 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 IRF2P14316 349 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 DGKQP52824 942 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 FUT2Q10981 343 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 CDK10Q15131 360 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 SGCAQ16586 387 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 SLC2A7Q6PXP3 512 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 BARD1Q99728 777 aaKnown RBP12.83□□□□□ -0.36
COL1A1-201ENST00000225964 FAM83CQ9BQN1 747 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 TTYH3Q9C0H2 523 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 SMOC2Q9H3U7 446 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 RNF11Q9Y3C5 154 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 SCO2O43819 266 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 RAB36O95755 333 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 SOD2P04179 222 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 GALTP07902 379 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 PIK3CBP42338 1070 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 GDF5P43026 501 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF84P51523 738 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 AQP4P55087 323 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 MEF2AQ02078 507 aaPredicted RBP12.83□□□□□ -0.36
COL1A1-201ENST00000225964 FLYWCH1Q4VC44 716 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 CDKL4Q5MAI5 379 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 DCUN1D3Q8IWE4 304 aa12.83□□□□□ -0.36
COL1A1-201ENST00000225964 TEX13DA0A0J9YY54 714 aaPredicted RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF860A6NHJ4 632 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 ITM2AO43736 263 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 SLC2A2P11168 524 aaPredicted RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 CBLBQ13191 982 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 IRF5Q13568 498 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 TMIGD1Q6UXZ0 262 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 OR1F2PQ96R84 312 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 FN3KQ9H479 309 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 CCDC86Q9H6F5 360 aaKnown RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 TCRBV7S3A2A0A539 114 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 HCRTO43612 131 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 KDM4BO94953 1096 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 FARS2O95363 451 aaKnown RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 SPARCP09486 303 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 RBMS1P29558 406 aaKnown RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 PMS2P3Q13401 168 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 TPRG1LQ5T0D9 272 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 C3orf33Q6P1S2 294 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 PPP1R14BQ96C90 147 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 FAXDC2Q96IV6 333 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF700Q9H0M5 742 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 LGALS13Q9UHV8 139 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 TIMM8BQ9Y5J9 83 aaPredicted RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 A0A1W2PP55 124 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 CD36P16671 472 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 CFL1P23528 166 aaKnown RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 CTBP2P56545 445 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 POU6F2P78424 691 aaPredicted RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 CDK6Q00534 326 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 FAM182AQ5T1J6 154 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 SLC44A3Q8N4M1 653 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 TIMMDC1Q9NPL8 285 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 TRIM36Q9NQ86 728 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 CFHP08603 1231 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 BCKDHAP12694 445 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms