RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 NT5CQ8TCD5 201 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 ATL1Q8WXF7 558 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 FBXL8Q96CD0 374 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 LRRC39Q96DD0 335 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 LINGO1Q96FE5 620 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 NPAS2Q99743 824 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 TRIM54Q9BYV2 358 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 ARL15Q9NXU5 204 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 HCN3Q9P1Z3 774 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 PDZD2O15018 2839 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 TACC2O95359 2948 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 ASPDHA6ND91 283 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 OR2W5A6NFC9 320 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 ENO4A6NNW6 628 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 RDH16O75452 317 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 F10P00742 488 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 ALOX12P18054 663 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 CA7P43166 264 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 SKP1P63208 163 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 TUBA3CQ13748 450 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 NSDHLQ15738 373 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 MEP1AQ16819 746 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 ZNF766Q5HY98 468 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 STEAP4Q687X5 459 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 SP5Q6BEB4 398 aaPredicted RBP14.94□□□□□ -0.02
ERCC1-201ENST00000013807 MTFR2Q6P444 385 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 TUBA3EQ6PEY2 450 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 SBSNQ6UWP8 590 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 TMEM207Q6UWW9 146 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 ARMC10Q8N2F6 343 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 SLC35F6Q8N357 371 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 ELP5Q8TE02 316 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 THAP3Q8WTV1 239 aaPredicted RBP14.94□□□□□ -0.02
ERCC1-201ENST00000013807 SCMH1Q96GD3 660 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 LPAR4Q99677 370 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 SEC14L3Q9UDX4 400 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 ZFP69BQ9UJL9 534 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 TEX264Q9Y6I9 313 aa14.94□□□□□ -0.02
ERCC1-201ENST00000013807 A8MUI8 341 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 BANF1O75531 89 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 UNC5CO95185 931 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 SMIM10L1P0DMW3 83 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 CD96P40200 585 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 SCTRP47872 440 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 MEF2AQ02078 507 aaPredicted RBP14.93□□□□□ -0.02
ERCC1-201ENST00000013807 PDAP1Q13442 181 aaKnown RBP14.93□□□□□ -0.02
ERCC1-201ENST00000013807 USP10Q14694 798 aaKnown RBP14.93□□□□□ -0.02
ERCC1-201ENST00000013807 MORF4L2Q15014 288 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 ABRAXAS2Q15018 415 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 PPP1R3AQ16821 1122 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 KRTCAP3Q53RY4 240 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 SFT2D3Q587I9 215 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 MFSD4BQ5TF39 518 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 HECTD2Q5U5R9 776 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 FAM45BPQ6NSW5 357 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 PAPD4Q6PIY7 484 aaKnown RBP14.93□□□□□ -0.02
ERCC1-201ENST00000013807 SYDE1Q6ZW31 735 aaPredicted RBP14.93□□□□□ -0.02
ERCC1-201ENST00000013807 CRLF3Q8IUI8 442 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 PDIK1LQ8N165 341 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 BEST3Q8N1M1 668 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 FAM45AQ8TCE6 357 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 ITLN2Q8WWU7 325 aaPredicted RBP14.93□□□□□ -0.02
ERCC1-201ENST00000013807 TBC1D20Q96BZ9 403 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 PYCR2Q96C36 320 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 MOCOSQ96EN8 888 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 PEX11GQ96HA9 241 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 SMIM10Q96HG1 83 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 DDX47Q9H0S4 455 aaKnown RBP14.93□□□□□ -0.02
ERCC1-201ENST00000013807 TRIM45Q9H8W5 580 aaPredicted RBP14.93□□□□□ -0.02
ERCC1-201ENST00000013807 KCNK13Q9HB14 408 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 COPG2Q9UBF2 871 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 ASIC3Q9UHC3 531 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 ZNF835Q9Y2P0 537 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 CSMD1Q96PZ7 3565 aa14.93□□□□□ -0.02
ERCC1-201ENST00000013807 ZSCAN12O43309 604 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 OR1F1O43749 312 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 UQCRHP07919 91 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 FHP07954 510 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 TCP1P17987 556 aaKnown RBP14.92□□□□□ -0.02
ERCC1-201ENST00000013807 JAK1P23458 1154 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 ELK3P41970 407 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 SLC26A5P58743 744 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 CDKL1Q00532 357 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 HYAL2Q12891 473 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 QSOX2Q6ZRP7 698 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 TBC1D19Q8N5T2 526 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 OR5T3Q8NGG3 340 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 ZCCHC10Q8TBK6 192 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 NEIL2Q969S2 332 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 SIGLEC12Q96PQ1 595 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 OLFM1Q99784 485 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 UTP23Q9BRU9 249 aaKnown RBP14.92□□□□□ -0.02
ERCC1-201ENST00000013807 WDR83Q9BRX9 315 aaKnown RBP14.92□□□□□ -0.02
ERCC1-201ENST00000013807 SLC6A16Q9GZN6 736 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 FBN2P35556 2912 aa14.92□□□□□ -0.02
ERCC1-201ENST00000013807 OTOGQ6ZRI0 2925 aa14.91□□□□□ -0.02
ERCC1-201ENST00000013807 DNAJC13O75165 2243 aa14.91□□□□□ -0.02
ERCC1-201ENST00000013807 TP73O15350 636 aa14.91□□□□□ -0.02
ERCC1-201ENST00000013807 TTI1O43156 1089 aa14.91□□□□□ -0.02
ERCC1-201ENST00000013807 NDUFS4O43181 175 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms