RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 FAM198BQ6UWH4 519 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 LRRC55Q6ZSA7 311 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SSX6Q7RTT6 188 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 XYLT1Q86Y38 959 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UBE2J2Q8N2K1 259 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FIBCD1Q8N539 461 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 OR5T2Q8NGG2 359 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 LCN9Q8WX39 176 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 COQ8BQ96D53 544 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ELMOD3Q96FG2 381 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ORAI3Q9BRQ5 295 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.91□□□□□ -1.461e-6■■□□□ 12.4
VPS13D-201ENST00000011700 ZNF334Q9HCZ1 680 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ERVK-5Q9HDB9 667 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 BRD7Q9NPI1 651 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 XPNPEP1Q9NQW7 623 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FAIMQ9NVQ4 179 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NPAP1Q9NZP6 1156 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NPIPA1Q9UND3 350 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 B3GNT3Q9Y2A9 372 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CMAHPQ9Y471 501 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ARL5AQ9Y689 179 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UGT1A9O60656 530 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 RFPL1O75677 317 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 HTR1AP08908 422 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 RHCEP18577 417 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UGT1A6P19224 532 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UGT1A1P22309 533 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UGT1A4P22310 534 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GKP32189 559 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 DSTNP60981 165 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC3A1Q07837 685 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GRK1Q15835 563 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UAP1L1Q3KQV9 507 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC30A6Q6NXT4 461 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 HACD2Q6Y1H2 254 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CREB3L2Q70SY1 520 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PDZD9Q8IXQ8 264 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 HS3ST5Q8IZT8 346 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC35F5Q8WV83 523 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 EDEM1Q92611 657 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CPB2Q96IY4 423 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PRDM12Q9H4Q4 367 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UGT1A7Q9HAW7 530 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UGT1A10Q9HAW8 530 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UGT1A8Q9HAW9 530 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PCDHAC2Q9Y5I4 1007 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PIK3C2AO00443 1686 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CSPG5O95196 566 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 OLFM2O95897 454 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GOT1P17174 413 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 STK19P49842 368 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PRPS1P60891 318 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 DEFA5Q01523 94 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 EN1Q05925 392 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CTC1Q2NKJ3 1217 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 METTL11BQ5VVY1 283 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FRG2Q64ET8 278 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 METAP1DQ6UB28 335 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 TPGS1Q6ZTW0 290 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SAMD11Q96NU1 681 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC2A13Q96QE2 648 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FRG2BQ96QU4 278 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 RAD9AQ99638 391 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FBXO6Q9NRD1 293 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC22A7Q9Y694 548 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 C1orf196B1AJZ1 125 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 ISM1B1AKI9 464 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 PEX11AO75192 247 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 VTNP04004 478 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 LINC00032P0C843 101 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 ADRA1BP35368 520 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 RBMXP38159 391 aaKnown RBP5.9□□□□□ -1.46
VPS13D-201ENST00000011700 RGS6P49758 472 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 PRKAG1P54619 331 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 IRF4Q15306 451 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF423Q2M1K9 1284 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 PROKR2Q8NFJ6 384 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 FAM174AQ8TBP5 190 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 IL4I1Q96RQ9 567 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 MTG2Q9H4K7 406 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 CIB4A0PJX0 185 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 UGDHO60701 494 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 KLK3P07288 261 aaPredicted RBP5.9□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF286BP0CG31 522 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 BMP4P12644 408 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF182P17025 639 aaPredicted RBP5.9□□□□□ -1.46
VPS13D-201ENST00000011700 ZIK1Q3SY52 487 aaPredicted RBP5.9□□□□□ -1.46
VPS13D-201ENST00000011700 ARL13AQ5H913 290 aaPredicted RBP5.9□□□□□ -1.46
VPS13D-201ENST00000011700 SLC27A4Q6P1M0 643 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 TIFABQ6ZNK6 161 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 CYS1Q717R9 158 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 TREX2Q9BQ50 279 aaPredicted RBP5.9□□□□□ -1.46
VPS13D-201ENST00000011700 DERL2Q9GZP9 239 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 IPPKQ9H8X2 491 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 DOT1LQ8TEK3 1739 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 A0A1W2PRQ8 180 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 AOC2O75106 756 aa5.9□□□□□ -1.46
VPS13D-201ENST00000011700 ERAL1O75616 437 aaKnown RBP5.9□□□□□ -1.46
VPS13D-201ENST00000011700 ADH1BP00325 375 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms