RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Acat2Q8CAY6 397 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gatad2aQ8CHY6 629 aaKnown RBP12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ca12Q8CI85 354 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Defb19Q8K3I8 83 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Acsl6Q91WC3 697 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Atoh8Q99NA2 322 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Desi1Q9CQT7 168 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vsig1Q9D2J4 407 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tmem269Q9D4Y8 254 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Pop5Q9DB28 169 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slc32a1O35633 525 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 CskP41241 450 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Kcnj9P48543 393 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Pitx1P70314 315 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Echdc2Q3TLP5 296 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 VclQ64727 1066 aaKnown RBP12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Metap1Q8BP48 386 aaKnown RBP12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Teddm1bQ8CC62 306 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tmem221Q8K071 230 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 GabrpQ8QZW7 440 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vmn1r18Q8R2C8 299 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mau2Q9D2X5 619 aaKnown RBP12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Btnl6A2CG22 539 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zfp949E9Q732 603 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Enpp1P06802 906 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cpne7Q0VE82 557 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Znf865Q3U3I9 1058 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Macrod2Q3UYG8 475 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Sim1Q61045 765 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Prkg2Q61410 762 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Smarcd3Q6P9Z1 483 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tas2r13Q7M720 305 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Sra1Q80VJ2 232 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Galnt12Q8BGT9 576 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Fate1Q8CEK7 99 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ift80Q8K057 777 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Neto1Q8R4I7 533 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ak6Q8VCP8 172 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mrps18aQ99N85 196 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 3110001I22RikQ9CZ70 312 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Aar2Q9D2V5 384 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Kcne2Q9D808 123 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zbtb32Q9JKD9 465 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dnaja4Q9JMC3 397 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 HnrnpdlQ9Z130 301 aaKnown RBP12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 HnrnpfQ9Z2X1 415 aaKnown RBP12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm5565A0A0G2JGB2 317 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Hoxc11P31313 304 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 TtkP35761 856 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ncf4P97369 339 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Hexim2Q3TVI4 313 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Q3UY34 256 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Fam189a2Q4FZH1 290 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 PkdccQ5RJI4 492 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cd300aQ6SJQ0 318 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tbc1d14Q8CGA2 694 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gramd1cQ8CI52 457 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zbtb6Q8K088 423 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 SarafQ8R3Q0 334 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr622Q8VGY7 317 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tmem159Q922Z1 161 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tex44Q9DA60 530 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 RhouQ9EQT3 261 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Nectin1Q9JKF6 515 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mapk9Q9WTU6 423 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm45713A0A1B0GS68 446 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tbc1d25A1A5B6 742 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zfp600A2A7V0 737 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm13088A2AGW6 460 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm7535F7CXE4 302 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Angpt1O08538 498 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Rgs5O08850 181 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Galnt1O08912 559 aaKnown RBP12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Pcmt1P23506 227 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 S100gP97816 79 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Phlda1Q62392 405 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cstf2Q8BIQ5 580 aaKnown RBP12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Fam46bQ8C152 427 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Wdr37Q8CBE3 496 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dppa4Q8CCG4 296 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr806Q8VFI2 313 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1052Q8VGR8 312 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slc2a10Q8VHD6 536 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Nipal2Q91WC7 383 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mrgprb4Q91ZC0 321 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mrpl9Q99N94 265 aaKnown RBP12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Uqcc2Q9CQY6 136 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mgrn1Q9D074 532 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Hddc3Q9D114 179 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cst9Q9Z0H6 137 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cldn9Q9Z0S7 217 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 A0A286YDM2 672 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm7929A0A286YDV3 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm21977F6U3N7 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm8247F6VRJ8 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Lrrc31F6VYM1 502 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm8005F6YKY3 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm3015F6ZAP6 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm8212F6ZMY5 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm7954F7BAX1 213 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms