RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 KIAA0141Q14154 515 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-216ENST00000640058 PTGISQ16647 500 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 LACTB2Q53H82 288 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-216ENST00000640058 PIGWQ7Z7B1 504 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 KCNMB4Q86W47 210 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 RTL3Q8N8U3 475 aaKnown RBP3.72□□□□□ -1.81
CCDC7-216ENST00000640058 NSMAFQ92636 917 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 PYCR2Q96C36 320 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 PSMB7Q99436 277 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 RNF121Q9H920 327 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 POMT2Q9UKY4 750 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 ZNF840PA6NDX5 716 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 SAP30O75446 220 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 STAG3L1P0CL83 205 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 NR2F1P10589 423 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 CAPZA2P47755 286 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 FAM106AQ4KMX7 169 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 C9orf152Q5JTZ5 239 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 ARMC4Q5T2S8 1044 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 GPR139Q6DWJ6 353 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 CFAP161Q6P656 301 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 REG3GQ6UW15 175 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 ENOSF1Q7L5Y1 443 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 CPEB2Q7Z5Q1 589 aaKnown RBP3.71□□□□□ -1.82
CCDC7-216ENST00000640058 CATSPER3Q86XQ3 398 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-216ENST00000640058 SPSB1Q96BD6 273 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 CCDC28BQ9BUN5 200 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 ACTL8Q9H568 366 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 PLCL2Q9UPR0 1127 aa3.71□□□□□ -1.82
CCDC7-216ENST00000640058 C17orf105B2RV13 164 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 OGTO15294 1046 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 ZNF354AO60765 605 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-216ENST00000640058 LDHCP07864 332 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 LIMK1P53667 647 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 DLK1P80370 383 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 BECN1Q14457 450 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 TMEM266Q2M3C6 531 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 ERMARDQ5T6L9 678 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 PHC2Q8IXK0 858 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 CCDC63Q8NA47 563 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 RHOXF1Q8NHV9 184 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 SSC4DQ8WTU2 575 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 PGM2Q96G03 612 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 ZNF558Q96NG5 402 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 MORF4L1Q9UBU8 362 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 IL36AQ9UHA7 158 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 PILRBQ9UKJ0 227 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 TSPAN16Q9UKR8 245 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 COLEC10Q9Y6Z7 277 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 NEDD4P46934 1319 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 NPHP3Q7Z494 1330 aa3.7□□□□□ -1.82
CCDC7-216ENST00000640058 A8MVM7 634 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 K7ENM7 598 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 TRAFD1O14545 582 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-216ENST00000640058 MAGEB2O15479 319 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 ZNF749O43361 778 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 MYL6BP14649 208 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 ACHEP22303 614 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 CPT2P23786 658 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 HSD17B3P37058 310 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 BTG1P62324 171 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 NAA16Q6N069 864 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-216ENST00000640058 VITQ6UXI7 678 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 SLC22A15Q8IZD6 547 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 GPD1LQ8N335 351 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 KLHL30-AS1Q8NEE0 82 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 OR9Q2Q8NGE9 314 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 NXPE2Q96DL1 559 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 SPATA33Q96N06 139 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 PHPT1Q9NRX4 125 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-216ENST00000640058 HCFC1P51610 2035 aa3.69□□□□□ -1.82
CCDC7-216ENST00000640058 ARID2Q68CP9 1835 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 A0A087WWV3 80 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 PDHXO00330 501 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 ADORA3P0DMS8 318 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 C4BPBP20851 252 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 EDNRAP25101 427 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 PKLRP30613 574 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 GPR183P32249 361 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 DUTP33316 252 aaKnown RBP3.68□□□□□ -1.82
CCDC7-216ENST00000640058 RAB28P51157 221 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 ERVK-16P61578 105 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 CACNG1Q06432 222 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 RBBP7Q16576 425 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 UPP1Q16831 310 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 KRTAP13-3Q3SY46 172 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 CFAP58Q5T655 872 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 SUSD4Q5VX71 490 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 TTC27Q6P3X3 843 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 C16orf54Q6UWD8 224 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 MFN1Q8IWA4 741 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 CCDC60Q8IWA6 550 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-216ENST00000640058 NME8Q8N427 588 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 FGFRL1Q8N441 504 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 XXYLT1Q8NBI6 393 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 HDAC11Q96DB2 347 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 RBM41Q96IZ5 413 aaKnown RBP3.68□□□□□ -1.82
CCDC7-216ENST00000640058 SNX25Q9H3E2 840 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms