RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 RIPPLY3P57055 190 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 HERVK_113P61574 105 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 PAX2Q02962 417 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 GCKRQ14397 625 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 CCL14Q16627 93 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 PCK2Q16822 640 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 PRR9Q5T870 116 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 ZNF658Q5TYW1 1059 aaPredicted RBP-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 REP15Q6BDI9 236 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 FAM71E1Q6IPT2 247 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 HMGN2P46Q86SG4 172 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 TMTC2Q8N394 836 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 GPR137CQ8N3F9 429 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 CARNMT1Q8N4J0 409 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 ZNF709Q8N972 641 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 OR1B1Q8NGR6 318 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 VN1R17PQ8TDU5 208 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 COL21A1Q96P44 957 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 CASD1Q96PB1 797 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 OR6C1Q96RD1 312 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 CCDC3Q9BQI4 270 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 PAGR1Q9BTK6 254 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 DPAGT1Q9H3H5 408 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 GORASP2Q9H8Y8 452 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 SMC4Q9NTJ3 1288 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 SARDHQ9UL12 918 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 GRIP1Q9Y3R0 1128 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 IL16Q14005 1332 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 RNF103O00237 685 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 O00370 1275 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 ARPC2O15144 300 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 HCRTR2O43614 444 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 PAGE4O60829 102 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 SLITRK3O94933 977 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 OR6B1O95007 311 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 DANCRP0C864 163 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 DLATP10515 647 aaKnown RBP-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 PSMB1P20618 241 aaKnown RBP-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 EIF3BP55884 814 aaKnown RBP-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 KRTAP12-1P59990 96 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 ORC2Q13416 577 aaPredicted RBP-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 PHKG1Q16816 387 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 VWC2Q2TAL6 325 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 KRTAP21-3Q3LHN1 58 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 DPCR1Q3MIW9 517 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 GPR33Q49SQ1 333 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 FAM106AQ4KMX7 169 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 NHSL2Q5HYW2 709 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 C2orf66Q6UXQ4 117 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 TMPRSS11FQ6ZWK6 438 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 CPEB2Q7Z5Q1 589 aaKnown RBP-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 SAXO1Q8IYX7 474 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 CEP57L1Q8IYX8 460 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 OR2AJ1Q8NGZ0 328 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 MOSPD2Q8NHP6 518 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 FBXO30Q8TB52 745 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 SGCDQ92629 289 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 SAAL1Q96ER3 474 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 RAVER2Q9HCJ3 691 aaKnown RBP-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 HACD3Q9P035 362 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 AMACRQ9UHK6 382 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 SATB2Q9UPW6 733 aa-0.14□□□□□ -2.43
LMBR1-222ENST00000638959 ARID2Q68CP9 1835 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 IGLV4-69A0A075B6H9 119 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 hCG_38984A0A1B0GV85 526 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 CYTIPO60759 359 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 WDHD1O75717 1129 aaPredicted RBP-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 PRAMEF12O95522 483 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 BAG3O95817 575 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 RARGP13631 454 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 RARSP54136 660 aaKnown RBP-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 GALCP54803 685 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 TNK1Q13470 666 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 POSTNQ15063 836 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 ECSCRQ19T08 205 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 ZNF311Q5JNZ3 666 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 ACSM2BQ68CK6 577 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 CDC73Q6P1J9 531 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 LINC01551Q86U37 167 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 MMD2Q8IY49 270 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 LGI2Q8N0V4 545 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 RNF149Q8NC42 400 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 OR5M9Q8NGP3 310 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 OR13F1Q8NGS4 319 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 PIGBQ92521 554 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 SMARCE1Q969G3 411 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 RMI2Q96E14 147 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 ANKRD27Q96NW4 1050 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 DACH2Q96NX9 599 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 TNFRSF13CQ96RJ3 184 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 GAD1Q99259 594 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 KIR2DL4Q99706 377 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 FUZQ9BT04 418 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 CRB3Q9BUF7 120 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 EGLN3Q9H6Z9 239 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 TLE6Q9H808 572 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 KCNK13Q9HB14 408 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 ZNF446Q9NWS9 450 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 TAS2R14Q9NYV8 317 aa-0.15□□□□□ -2.43
LMBR1-222ENST00000638959 CHKBQ9Y259 395 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms